RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 PARP15Q460N3 678 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 PRRT3Q5FWE3 981 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 EFHC2Q5JST6 749 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 SPECC1LQ69YQ0 1117 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 DNAJC24Q6P3W2 148 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 IGF2-ASQ6U949 168 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 ZNF571Q7Z3V5 609 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 NPWQ8N729 165 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 HCAR2Q8TDS4 363 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 TSACCQ96A04 125 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 ECHDC3Q96DC8 303 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 ATXN7L3BQ96GX2 97 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 TBATAQ96M53 351 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 UBL7Q96S82 380 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 KCTD15Q96SI1 283 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 POLR1BQ9H9Y6 1135 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 PCDH12Q9NPG4 1184 aa12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 IPO11Q9UI26 975 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-203ENST00000415281 TTC24A2A3L6 582 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 NTN3O00634 580 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 NEMP1O14524 444 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 IGSF6O95976 241 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 C6P13671 934 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 TCF4P15884 667 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 PRKCIP41743 596 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 CSNK1DP48730 415 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 LIG3P49916 1009 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 DUSP3P51452 185 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 NDST2P52849 883 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 AIF1P55008 147 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 INPP5AQ14642 412 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 TDRD12Q587J7 1177 aaKnown RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 C6orf132Q5T0Z8 1188 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 MACC1Q6ZN28 852 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 VSTM4Q8IW00 320 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 CBARPQ8N350 705 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 MAPK15Q8TD08 544 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 IQCDQ96DY2 449 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 NAF1Q96HR8 494 aaKnown RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 VCPIP1Q96JH7 1222 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 ZNF578Q96N58 590 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 SLC46A1Q96NT5 459 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 FCRL3Q96P31 734 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 DEPDC7Q96QD5 511 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 APOOQ9BUR5 198 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 SNRNP25Q9BV90 132 aaKnown RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 SPASTQ9UBP0 616 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 APOBEC3BQ9UH17 382 aaKnown RBP12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 SATB2Q9UPW6 733 aa12.53□□□□□ -0.4
NCKIPSD-203ENST00000415281 TMEM202A6NGA9 273 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 CDRT15L2A8MXV6 281 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 H3BM21 787 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 DDX3XO00571 662 aaKnown RBP eCLIP12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 TRAFD1O14545 582 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 EFSO43281 561 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 FUCA1P04066 466 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 ERCC2P18074 760 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 MMP12P39900 470 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 PEX5P50542 639 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 HK3P52790 923 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 IHHQ14623 411 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 PTPRRQ15256 657 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 NR0B2Q15466 257 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 SARM1Q6SZW1 724 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 LRRC69Q6ZNQ3 347 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 SRLQ86TD4 932 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 CXorf40AQ8TE69 158 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 BTN2A2Q8WVV5 523 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 SYN2Q92777 582 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 ARHGEF26Q96DR7 871 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 CATSPERBQ9H7T0 1116 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 CPNE5Q9HCH3 593 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 ETNK2Q9NVF9 386 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 UBA2Q9UBT2 640 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 PCSK1NQ9UHG2 260 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 AP4E1Q9UPM8 1137 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 OR1A2Q9Y585 309 aa12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 SETXQ7Z333 2677 aaKnown RBP12.52□□□□□ -0.41
NCKIPSD-203ENST00000415281 A0A1W2PQM1 296 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 FGF10O15520 208 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 RRP8O43159 456 aaKnown RBP12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 LRCH4O75427 683 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 IL1R2P27930 398 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 MIPP30301 263 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 SUOXP51687 545 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 THOP1P52888 689 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 ERVPABLB-1P60509 514 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 PPARDQ03181 441 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 DPYSQ14117 519 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 PTK2BQ14289 1009 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 LRRC14Q15048 493 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 ERMARDQ5T6L9 678 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 FAXCQ5TGI0 409 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 HGSNATQ68CP4 663 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 TXNRD3NBQ6F5E7 133 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 OGFOD3Q6PK18 319 aa12.51□□□□□ -0.41
NCKIPSD-203ENST00000415281 LIPIQ6XZB0 460 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms