RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ABCA5Q8WWZ7 1642 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 CCDC182A6NF36 153 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 OTOL1A6NHN0 477 aaPredicted RBP18.57■□□□□ 0.56
SHANK3-202ENST00000414786 DDX3YO15523 660 aaKnown RBP18.57■□□□□ 0.56
SHANK3-202ENST00000414786 RBL1P28749 1068 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 IL12BP29460 328 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 RAB27AP51159 221 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 ERVK-24P63145 666 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 ALX1Q15699 326 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 C12orf56Q8IXR9 622 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 PSMA8Q8TAA3 256 aa18.57■□□□□ 0.56
SHANK3-202ENST00000414786 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.57■□□□□ 0.561e-6■■■□□ 14.7
SHANK3-202ENST00000414786 CAMTA2O94983 1202 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 STATHP02808 62 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 APODP05090 189 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 ANXA6P08133 673 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 GRIA3P42263 894 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 ALDH5A1P51649 535 aaPredicted RBP18.56■□□□□ 0.56
SHANK3-202ENST00000414786 CCINQ13939 588 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 AADACL2Q6P093 401 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SMARCD3Q6STE5 483 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 ELAC1Q9H777 363 aaKnown RBP18.56■□□□□ 0.56
SHANK3-202ENST00000414786 NECTIN3Q9NQS3 549 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 KCNQ5Q9NR82 932 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SYN1P17600 705 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SP3Q02447 781 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 FAM187BQ17R55 369 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 C2orf49Q9BVC5 232 aaPredicted RBP18.56■□□□□ 0.56
SHANK3-202ENST00000414786 GMPPBQ9Y5P6 360 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 GCATO75600 419 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SSR2P43308 183 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 ARMC10Q8N2F6 343 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 COQ8BQ96D53 544 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 MRGBPQ9NV56 204 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 A0A0X1KG70 313 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SEMA3DO95025 777 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 GNRH1P01148 92 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 FCGR1AP12314 374 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 EFNA1P20827 205 aaPredicted RBP18.56■□□□□ 0.56
SHANK3-202ENST00000414786 CRABP2P29373 138 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 CDC42P60953 191 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 TSPAN1O60635 241 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 ARFIP1P53367 373 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 CBX3Q13185 183 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 ZFP28Q8NHY6 868 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SUN3Q8TAQ9 357 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 MOCS1Q9NZB8 636 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 RGS17Q9UGC6 210 aaPredicted RBP18.56■□□□□ 0.56
SHANK3-202ENST00000414786 GCC2Q8IWJ2 1684 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 PGAM1P18669 254 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 STAT5AP42229 794 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 FAAP100Q0VG06 881 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SPANXN3Q5MJ09 141 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 LRRC70Q7Z2Q7 622 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 HID1Q8IV36 788 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SLC22A15Q8IZD6 547 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 UBE2J2Q8N2K1 259 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SLC38A3Q99624 504 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 OR12D3Q9UGF7 316 aa18.56■□□□□ 0.56
SHANK3-202ENST00000414786 SLC9A3R1O14745 358 aaPredicted RBP18.55■□□□□ 0.56
SHANK3-202ENST00000414786 ZNF132P52740 706 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 PCBP2Q15366 365 aaKnown RBP eCLIP18.55■□□□□ 0.562e-6■■■□□ 17.9
SHANK3-202ENST00000414786 TLR1Q15399 786 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 CFAP97Q9P2B7 532 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 ATP6AP2A0A1C7CYW4 349 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 SSU72P8A0A1W2PR75 194 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 ATP6AP2O75787 350 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 MNDAP41218 407 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 RAB2AP61019 212 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 HDDC3Q8N4P3 179 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 TBC1D10AQ9BXI6 508 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 KDM5CP41229 1560 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 NFASCO94856 1347 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 ZNF16P17020 682 aaPredicted RBP18.55■□□□□ 0.56
SHANK3-202ENST00000414786 CALB2P22676 271 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 VLDLRP98155 873 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 GIT2Q14161 759 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 ZMYND11Q15326 602 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 INO80DQ53TQ3 878 aaPredicted RBP18.55■□□□□ 0.56
SHANK3-202ENST00000414786 SPESP1Q6UW49 350 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 CPNE1Q99829 537 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 TPK1Q9H3S4 243 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 SGK2Q9HBY8 427 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 ABCC13Q9NSE7 274 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 TISP43B9A030 160 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 C1orf94Q6P1W5 598 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 PTCHD4Q6ZW05 846 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 CLIP4Q8N3C7 705 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 PTGR2Q8N8N7 351 aaPredicted RBP18.55■□□□□ 0.56
SHANK3-202ENST00000414786 PIGNO95427 931 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 ADH1AP07327 375 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 NR0B1P51843 470 aaKnown RBP18.55■□□□□ 0.56
SHANK3-202ENST00000414786 STXBP5Q5T5C0 1151 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 PIK3R6Q5UE93 754 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 NELL1Q92832 810 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 EXOSC8Q96B26 276 aaKnown RBP18.55■□□□□ 0.56
SHANK3-202ENST00000414786 HIST1H2AAQ96QV6 131 aa18.55■□□□□ 0.56
SHANK3-202ENST00000414786 FRMD8Q9BZ67 464 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms