RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 GIMAP2Q9UG22 337 aa13.91□□□□□ -0.18
NUB1-201ENST00000413040 VWA7Q9Y334 891 aa13.91□□□□□ -0.18
NUB1-201ENST00000413040 A0A087X1B8 175 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 UBA6A0AVT1 1052 aaPredicted RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 PSMD12O00232 456 aaPredicted RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 NELFEP18615 380 aaKnown RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 ZNF157P51786 506 aaPredicted RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 ROR2Q01974 943 aaKnown RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 NSUN2Q08J23 767 aaKnown RBP eCLIP13.9□□□□□ -0.18
NUB1-201ENST00000413040 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.9□□□□□ -0.18
NUB1-201ENST00000413040 PAOXQ6QHF9 649 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 LILRA2Q8N149 483 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 CALML6Q8TD86 181 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 KLHL32Q96NJ5 620 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 RPRD1AQ96P16 312 aaPredicted RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 PRPF18Q99633 342 aaKnown RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 TRIM62Q9BVG3 475 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 FAM192AQ9GZU8 254 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 DSEQ9UL01 958 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 GRIA2P42262 883 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 MLLT6P55198 1093 aaPredicted RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 TBX4P57082 545 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 ADGRE1Q14246 886 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 MAPRE1Q15691 268 aaKnown RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 PIK3R6Q5UE93 754 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 AMIGO2Q86SJ2 522 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 SH3RF2Q8TEC5 729 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 PRKD2Q9BZL6 878 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 SENP6Q9GZR1 1112 aaPredicted RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 TREX1Q9NSU2 369 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 MARCH4Q9P2E8 410 aaPredicted RBP13.9□□□□□ -0.18
NUB1-201ENST00000413040 SNX13Q9Y5W8 968 aa13.9□□□□□ -0.18
NUB1-201ENST00000413040 SIX3O95343 332 aaPredicted RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 CALRP27797 417 aaKnown RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 ADRA1AP35348 466 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 TECRLQ5HYJ1 363 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 IL23RQ5VWK5 629 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 GABPB2Q8TAK5 448 aaPredicted RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 SPPL2BQ8TCT7 592 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 B3GALT6Q96L58 329 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 SERPINB11Q96P15 392 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 SPATA16Q9BXB7 569 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 SMOC2Q9H3U7 446 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 EML4Q9HC35 981 aaKnown RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 RGS18Q9NS28 235 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 IGSF5Q9NSI5 407 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 ZDHHC7Q9NXF8 308 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 NEU3Q9UQ49 428 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 NPHS1O60500 1241 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 CRTAMO95727 393 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 KCNC1P48547 511 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 OGFRL1Q5TC84 451 aaPredicted RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 AP1ARQ63HQ0 302 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 CWF19L1Q69YN2 538 aaKnown RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 CNTN4Q8IWV2 1026 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 DDIASQ8IXT1 998 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 SLC25A51Q9H1U9 297 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 GMIPQ9P107 970 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 TRAF6Q9Y4K3 522 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 PTGDR2Q9Y5Y4 395 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 LRRC14BA6NHZ5 514 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 MRASO14807 208 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 CACNG3O60359 315 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 RNASEH2AO75792 299 aaKnown RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 RBP1P09455 135 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 ARL1P40616 181 aaPredicted RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 SATB1Q01826 763 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 STX5Q13190 355 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 GALNT3Q14435 633 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 RBBP5Q15291 538 aaKnown RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 ZNF280BQ86YH2 543 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 TTC9BQ8N6N2 239 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 SEMA3CQ99985 751 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 GRIP2Q9C0E4 1043 aa13.89□□□□□ -0.19
NUB1-201ENST00000413040 GMPR2Q9P2T1 348 aaKnown RBP13.89□□□□□ -0.19
NUB1-201ENST00000413040 PPP6CO00743 305 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 KIF3CO14782 793 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 TPST1O60507 370 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 CLPTM1O96005 669 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 CDKN2DP55273 166 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 STX1BP61266 288 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 CPSF7Q8N684 471 aaKnown RBP13.88□□□□□ -0.19
NUB1-201ENST00000413040 LPGAT1Q92604 370 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 NOL6Q9H6R4 1146 aaKnown RBP13.88□□□□□ -0.19
NUB1-201ENST00000413040 TSR3Q9UJK0 312 aaKnown RBP13.88□□□□□ -0.19
NUB1-201ENST00000413040 SLC27A5Q9Y2P5 690 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 TRIM38O00635 465 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 DUSP11O75319 330 aaKnown RBP13.88□□□□□ -0.19
NUB1-201ENST00000413040 STAMBPO95630 424 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 IGLV3-25P01717 112 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 GFAPP14136 432 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 CLCN5P51795 746 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 ZNF33AQ06730 810 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 RPS6KA2Q15349 733 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 C10orf120Q5SQS8 335 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 ZFP1Q6P2D0 407 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 TRPV1Q8NER1 839 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 TSPAN17Q96FV3 270 aa13.88□□□□□ -0.19
NUB1-201ENST00000413040 SPON2Q9BUD6 331 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms