RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 CTPS1P17812 591 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 ENGP17813 658 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 NFKB1P19838 968 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 XPAP23025 273 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 CD68P34810 354 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 CD86P42081 329 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 MAPK8P45983 427 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 ATP5OP48047 213 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 NR2C2P49116 596 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 CSNK1EP49674 416 aaKnown RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 CCR5P51681 352 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 CLDN2P57739 230 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 EIF3EP60228 445 aaKnown RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 SKOR1P84550 965 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 GRIK2Q13002 908 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 PCSK7Q16549 785 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 DUOXA1Q1HG43 343 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 AASDHQ4L235 1098 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 TMEM259Q4ZIN3 620 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 TEX44Q53QW1 395 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 SLC45A4Q5BKX6 768 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 PRAMEF14Q5SWL7 426 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 ALG1LQ6GMV1 187 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 SLC23A3Q6PIS1 610 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 PRPF39Q86UA1 669 aaKnown RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 HORMAD1Q86X24 394 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 ZNF567Q8N184 647 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 SLC35F6Q8N357 371 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 PAF1Q8N7H5 531 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 C12orf50Q8NA57 414 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 TRIM58Q8NG06 486 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 SPATA22Q8NHS9 363 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 ATG4AQ8WYN0 398 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 SERAC1Q96JX3 654 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 EDEM2Q9BV94 578 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 GTPBP2Q9BX10 602 aaKnown RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 TDRD1Q9BXT4 1180 aaKnown RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 PCED1AQ9H1Q7 454 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 KDM4CQ9H3R0 1056 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 CAPN10Q9HC96 672 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 AASDHPPTQ9NRN7 309 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 UBP1Q9NZI7 540 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 CHKBQ9Y259 395 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 EFR3BQ9Y2G0 817 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 PCDHB9Q9Y5E1 797 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 TRPM6Q9BX84 2022 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.76□□□□□ -1.17
CPSF4-202ENST00000412686 A0A1W2PR77 199 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 NPIPB15A6NHN6 443 aaPredicted RBP7.76□□□□□ -1.17
CPSF4-202ENST00000412686 CDX4O14627 284 aaPredicted RBP7.76□□□□□ -1.17
CPSF4-202ENST00000412686 KCNN4O15554 427 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 TSPAN6O43657 245 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 AP1G1O43747 822 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 FZD6O60353 706 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 LRP3O75074 770 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 SOCS5O75159 536 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 CPP00450 1065 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 PRLP01236 227 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 ATP1A1P05023 1023 aaKnown RBP7.76□□□□□ -1.17
CPSF4-202ENST00000412686 SERPINF2P08697 491 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 C6P13671 934 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 GNSP15586 552 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 GM2AP17900 193 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 LHCGRP22888 699 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 MMP12P39900 470 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 GDF10P55107 478 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 FAM193AP78312 1265 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 CCDC15Q0P6D6 951 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 XRCC4Q13426 336 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 GALNT3Q14435 633 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 GRM3Q14832 879 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 SIX1Q15475 284 aaPredicted RBP7.76□□□□□ -1.17
CPSF4-202ENST00000412686 KIF19Q2TAC6 998 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 TMEM52BQ4KMG9 183 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 ZNF569Q5MCW4 686 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 ARMC12Q5T9G4 340 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 SEL1L2Q5TEA6 688 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 NAPEPLDQ6IQ20 393 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 KIAA1161Q6NSJ0 714 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 BRAT1Q6PJG6 821 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 GCNT7Q6ZNI0 430 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 RFLNAQ6ZTI6 216 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 BZW1Q7L1Q6 419 aaKnown RBP7.76□□□□□ -1.17
CPSF4-202ENST00000412686 KDELC2Q7Z4H8 507 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 PRUNE1Q86TP1 453 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 TSPAN33Q86UF1 283 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 SLC13A5Q86YT5 568 aaPredicted RBP7.76□□□□□ -1.17
CPSF4-202ENST00000412686 TMEM145Q8NBT3 493 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 LPCAT1Q8NF37 534 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 CCDC110Q8TBZ0 833 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 CXorf40AQ8TE69 158 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 PIH1D2Q8WWB5 315 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 C1orf54Q8WWF1 131 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 HTR3CQ8WXA8 447 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 RAB7BQ96AH8 199 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 IMP4Q96G21 291 aaKnown RBP7.76□□□□□ -1.17
CPSF4-202ENST00000412686 TEKT5Q96M29 485 aa7.76□□□□□ -1.17
CPSF4-202ENST00000412686 RBM15Q96T37 977 aaKnown RBP eCLIP7.76□□□□□ -1.17
CPSF4-202ENST00000412686 GORASP1Q9BQQ3 440 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms