RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SORCS3Q9UPU3 1222 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 UBR1Q8IWV7 1749 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 AP3D1O14617 1153 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CAPN5O15484 640 aaPredicted RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 MAN1A2O60476 641 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ZNF780AO75290 641 aaPredicted RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 TIPRLO75663 272 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CLPXO76031 633 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 IGHV2-70P01814 119 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 KLK3P07288 261 aaPredicted RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 ITGA4P13612 1032 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 NMT1P30419 496 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 CLCQ05315 142 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 GRIK2Q13002 908 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ALKBH1Q13686 389 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 RAPSNQ13702 412 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 STAT4Q14765 748 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TMEM132BQ14DG7 1078 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 STXBP2Q15833 593 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 MPP7Q5T2T1 576 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 KANK2Q63ZY3 851 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 DPY19L2P1Q6NXN4 242 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 NUP54Q7Z3B4 507 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 LINC00523Q86TU6 105 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 MTDHQ86UE4 582 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 SLC22A16Q86VW1 577 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ARMC8Q8IUR7 673 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 C4orf32Q8N8J7 132 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 C11orf65Q8NCR3 313 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TMEM35BQ8NCS4 154 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 C1orf50Q9BV19 199 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SPACA1Q9HBV2 294 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 MLXIPLQ9NP71 852 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 MTMR4Q9NYA4 1195 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 NYAP2Q9P242 653 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ANKFY1Q9P2R3 1169 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SRP68Q9UHB9 627 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 ATXN7L1Q9ULK2 861 aaPredicted RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 RUVBL1Q9Y265 456 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 SESN1Q9Y6P5 492 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SF3B1O75533 1304 aaKnown RBP eCLIP5.26□□□□□ -1.575e-6■■■■■ 112
HERC4-205ENST00000412272 A0A1B0GV90 55 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 KLF11O14901 512 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 SPOPO43791 374 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CBR3O75828 277 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 S100A9P06702 114 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 MBL2P11226 248 aaPredicted RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 TFEBP19484 476 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 EIF2S3P41091 472 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 DGKQP52824 942 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ERVFC1P60507 584 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZNF91Q05481 1191 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZNF33AQ06730 810 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 NFATC3Q12968 1075 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ORC1Q13415 861 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 GCKRQ14397 625 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZNF846Q147U1 533 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 TMEM44Q2T9K0 475 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 FAM214AQ32MH5 1076 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZPBP2Q6X784 338 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 SPOCD1Q6ZMY3 1216 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ENOSF1Q7L5Y1 443 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZBTB46Q86UZ6 589 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 PDPRQ8NCN5 879 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 HM13Q8TCT9 377 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZHX1-C8orf76Q96EF9 292 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 RIPOR3Q96MK2 946 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 SLC9A7Q96T83 725 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 RMDN3Q96TC7 470 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 LSM14BQ9BX40 385 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 SLC6A15Q9H2J7 730 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 STN1Q9H668 368 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZNF556Q9HAH1 456 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CDHR5Q9HBB8 845 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 LRRC4Q9HBW1 653 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 AAASQ9NRG9 546 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 BMP2KQ9NSY1 1161 aaPredicted RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 THUMPD1Q9NXG2 353 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 ARMCX3Q9UH62 379 aaPredicted RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 DBR1Q9UK59 544 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 PLLPQ9Y342 182 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 SCN7AQ01118 1682 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 COL1A1P02452 1464 aaPredicted RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 LINC00862A6NCI5 91 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 EFCAB10A6NFE3 127 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CLDN25C9JDP6 229 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 H3BMM5 538 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 TRIM38O00635 465 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CLDN4O14493 209 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 TSPAN6O43657 245 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 VEGFDO43915 354 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CIB2O75838 187 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 DGAT1O75907 488 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 TTC4O95801 387 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 SERPINF2P08697 491 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 IFI30P13284 250 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZNF182P17025 639 aaPredicted RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 G0S2P27469 103 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 SERPINB1P30740 379 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 GPX4P36969 197 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms