RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 ASB18Q6ZVZ8 466 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 ZC3H18Q86VM9 953 aaKnown RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 CHSY1Q86X52 802 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 C12orf56Q8IXR9 622 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 KIAA1143Q96AT1 154 aaPredicted RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 SLC45A3Q96JT2 553 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CAPZA3Q96KX2 299 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 FCRL2Q96LA5 508 aaPredicted RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 CCDC114Q96M63 670 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CCDC42Q96M95 316 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CEP63Q96MT8 703 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 HAPLN3Q96S86 360 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 EPAS1Q99814 870 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 B3GNT4Q9C0J1 378 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 LACRTQ9GZZ8 138 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CDH19Q9H159 772 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 DEF6Q9H4E7 631 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 GPN2Q9H9Y4 310 aaPredicted RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 APOBEC3GQ9HC16 384 aaKnown RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 SLC39A2Q9NP94 309 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CWC15Q9P013 229 aaKnown RBP7.04□□□□□ -1.28
LSM8-202ENST00000411938 VPS18Q9P253 973 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 DKK3Q9UBP4 350 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 HESX1Q9UBX0 185 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 SNX12Q9UMY4 172 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 NAALADL1Q9UQQ1 740 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 DAAM1Q9Y4D1 1078 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 CAPN6Q9Y6Q1 641 aa7.04□□□□□ -1.28
LSM8-202ENST00000411938 APCP25054 2843 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 MACROD2A1Z1Q3 448 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 IGLON5A6NGN9 336 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 LRRC53A6NM62 1247 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 K7EM74 188 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 XPO1O14980 1071 aaKnown RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 EPHB6O15197 1021 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 GNA14O95837 355 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 PRNPP04156 253 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 LCP1P13796 627 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 CTSEP14091 401 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 TCP1P17987 556 aaKnown RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 TACR2P21452 398 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 ITGB7P26010 798 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 EIF4A3P38919 411 aaKnown RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 TNNT3P45378 269 aaPredicted RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 LMAN1P49257 510 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 PLK1P53350 603 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 MARSP56192 900 aaKnown RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 PFN3P60673 137 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 C2orf54Q08AI8 447 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 CDC20Q12834 499 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 ELOCQ15369 112 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 EIF2S3LQ2VIR3 472 aaKnown RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 CCDC40Q4G0X9 1142 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 RAP1GAP2Q684P5 730 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 ARHGAP17Q68EM7 881 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 LVRNQ6Q4G3 990 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 LEKR1Q6ZMV7 388 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 CIR1Q86X95 450 aaPredicted RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 HID1Q8IV36 788 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 SLITRK4Q8IW52 837 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 FSTL5Q8N475 847 aaPredicted RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 MMGT1Q8N4V1 131 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 SLC4A11Q8NBS3 891 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 TMIEQ8NEW7 156 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 OR6C4Q8NGE1 309 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 GOLGA5Q8TBA6 731 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 UBA3Q8TBC4 463 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 CPT1CQ8TCG5 803 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 GRIN3AQ8TCU5 1115 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 TMC2Q8TDI7 906 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 TBATAQ96M53 351 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 TAAR9Q96RI9 348 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 KLF6Q99612 283 aaPredicted RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 HDAC8Q9BY41 377 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 SEMA6CQ9H3T2 930 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 LUC7LQ9NQ29 371 aaKnown RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 CNGB3Q9NQW8 809 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 FAM207AQ9NSI2 230 aaPredicted RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 DONSONQ9NYP3 566 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 XPO7Q9UIA9 1087 aaKnown RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 VPS28Q9UK41 221 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 HPCAL4Q9UM19 191 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 TFR2Q9UP52 801 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 JRKLQ9Y4A0 524 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 ZFHX3Q15911 3703 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 MED13LQ71F56 2210 aa7.03□□□□□ -1.28
LSM8-202ENST00000411938 DIDO1Q9BTC0 2240 aaKnown RBP7.03□□□□□ -1.28
LSM8-202ENST00000411938 FBN3Q75N90 2809 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 F5H5T6 163 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 RNF103O00237 685 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 PDE2AO00408 941 aaPredicted RBP7.02□□□□□ -1.29
LSM8-202ENST00000411938 PIK3R2O00459 728 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 NEMP1O14524 444 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 AKR1B10O60218 316 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 RAD1O60671 282 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 SRGAP2O75044 1071 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 APOEP02649 317 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 LTFP02788 710 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 IVLP07476 585 aa7.02□□□□□ -1.29
LSM8-202ENST00000411938 PLEKP08567 350 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms