RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 KYQ8NBH2 561 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 SLC39A8Q9C0K1 460 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 EPB41L1Q9H4G0 881 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 POPDC2Q9HBU9 364 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 RRN3Q9NYV6 651 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 ATXN2Q99700 1313 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 PGM3O95394 542 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 HMGCRP04035 888 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 EIF2B2P49770 351 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 ARFIP1P53367 373 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 NRF1Q16656 503 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 TAS1R2Q8TE23 839 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 C18orf25Q96B23 403 aaPredicted RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 OSGEPQ9NPF4 335 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 TPRKBQ9Y3C4 175 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 OR10H3O60404 316 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 MAPK7Q13164 816 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 KPNB1Q14974 876 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 DHFR2Q86XF0 187 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 DAGLBQ8NCG7 672 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 RNF31Q96EP0 1072 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 CROTQ9UKG9 612 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 IKZF3Q9UKT9 509 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 GIT1Q9Y2X7 761 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 WNT10BO00744 389 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 LSM8O95777 96 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 CASRP41180 1078 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 GALK1P51570 392 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 UGT2B15P54855 530 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 PTGES3Q15185 160 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 ISLR2Q6UXK2 745 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 CHERPQ8IWX8 916 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 BTBD7Q9P203 1132 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 MAFFQ9ULX9 164 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 A8MU76 341 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CDC40O60508 579 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 KERAO60938 352 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 PGAM1P18669 254 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CCNA2P20248 432 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 ALDH4A1P30038 563 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 PPP4CP60510 307 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 OC90Q02509 493 aaPredicted RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 GPC2Q8N158 579 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 TMA7Q9Y2S6 64 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 EVPLQ92817 2033 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 TRAPPC6AO75865 159 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 EPHX1P07099 455 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 ETS1P14921 441 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 GNALP38405 381 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 STAT5AP42229 794 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CAPZA1P52907 286 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 SP2Q02086 613 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 MGAT5Q09328 741 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 GRSF1Q12849 480 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 ZC3H12AQ5D1E8 599 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 RAVER1Q8IY67 606 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 DEFB106AQ8N104 65 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 SAMD3Q8N6K7 520 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 FEM1CQ96JP0 617 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 LGMNQ99538 433 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 NRCAMQ92823 1304 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 PRKAR2AP13861 404 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 SLC6A2P23975 617 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CHAF1BQ13112 559 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 RIN1Q13671 783 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 SLC30A6Q6NXT4 461 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 DEFB119Q8N690 84 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 FCRL4Q96PJ5 515 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 TRIM2Q9C040 744 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 NUAK2Q9H093 628 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 ISCUQ9H1K1 167 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 FBXO6Q9NRD1 293 aaPredicted RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.28□□□□□ -0.66e-8■■■□□ 14.7
PRPF40A-202ENST00000410080 MGAT4AQ9UM21 535 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 TMCC2O75069 709 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 PDE5AO76074 875 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CCDC166P0CW27 439 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CALB2P22676 271 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 PSMB4P28070 264 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CD52P31358 61 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 SLC26A3P40879 764 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 SLC12A3P55017 1021 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CCNI2Q6ZMN8 369 aaPredicted RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 ZDHHC17Q8IUH5 632 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 PURBQ96QR8 312 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 HIST1H2AAQ96QV6 131 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 MCMBPQ9BTE3 642 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 ZYG11BQ9C0D3 744 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 TNS2Q63HR2 1409 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 FAM205AQ6ZU69 1335 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 A0A0X1KG70 313 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 TPP1O14773 563 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CLPTM1O96005 669 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 DUSP4Q13115 394 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 SP140Q13342 867 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CRY2Q49AN0 593 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 ATAT1Q5SQI0 421 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 PYHIN1Q6K0P9 492 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms