RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ATP5DP30049 168 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 TTKP33981 857 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 RYKP34925 604 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 ID2Q02363 134 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 PRPF4BQ13523 1007 aaKnown RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 ASIC2Q16515 512 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 GSTA3Q16772 222 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 PIK3CD-AS1Q5SR53 167 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 HMBOX1Q6NT76 420 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 IL27RAQ6UWB1 636 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 DEF8Q6ZN54 512 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 YTHDF3Q7Z739 585 aaKnown RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 CNGA4Q8IV77 575 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 CCDC105Q8IYK2 499 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 CARNMT1Q8N4J0 409 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 TMEM116Q8NCL8 245 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 RASSF8Q8NHQ8 419 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 MSI2Q96DH6 328 aaKnown RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 GPATCH1Q9BRR8 931 aaKnown RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 WDR83Q9BRX9 315 aaKnown RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 NUF2Q9BZD4 464 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 ERVMER34-1Q9H9K5 563 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 XAB2Q9HCS7 855 aaKnown RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 RASAL2Q9UJF2 1139 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 CORO1CQ9ULV4 474 aaPredicted RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 RAP2CQ9Y3L5 183 aa5.34□□□□□ -1.55
LSM5-206ENST00000409987 ZFP37Q9Y6Q3 630 aaPredicted RBP5.34□□□□□ -1.55
LSM5-206ENST00000409987 A0A1W2PPC1 479 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 A0A1W2PQF6 199 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 C17orf102A2RUQ5 167 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 LIPT2A6NK58 231 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 A6NNC1 897 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 C19orf81C9J6K1 198 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 NPIPB11E5RHQ5 1161 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 E5RJQ4 531 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 H0Y626 953 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 TLX3O43711 291 aaPredicted RBP5.33□□□□□ -1.56
LSM5-206ENST00000409987 HTATSF1O43719 755 aaKnown RBP5.33□□□□□ -1.56
LSM5-206ENST00000409987 TLR2O60603 784 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 TGDSO95455 350 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 QDPRP09417 244 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 FAM200BP0CF97 657 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 PTPN2P17706 415 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 TNFSF8P32971 234 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 GNAQP50148 359 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 HDAC4P56524 1084 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 PPARDQ03181 441 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 CEBPZQ03701 1054 aaKnown RBP5.33□□□□□ -1.56
LSM5-206ENST00000409987 SMC1AQ14683 1233 aaKnown RBP5.33□□□□□ -1.56
LSM5-206ENST00000409987 VEPH1Q14D04 833 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 ALG11Q2TAA5 492 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 C6orf10Q5SRN2 563 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 PLEKHS1Q5SXH7 462 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 TTI2Q6NXR4 508 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 FAM83HQ6ZRV2 1179 aaPredicted RBP5.33□□□□□ -1.56
LSM5-206ENST00000409987 SLFN11Q7Z7L1 901 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 TBC1D26Q86UD7 250 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 GPSM1Q86YR5 675 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 DHX40Q8IX18 779 aaKnown RBP5.33□□□□□ -1.56
LSM5-206ENST00000409987 KIAA2013Q8IYS2 634 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 FAM185AQ8N0U4 392 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 OR8H3Q8N146 312 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 KDM1BQ8NB78 822 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 GOT1L1Q8NHS2 421 aaPredicted RBP5.33□□□□□ -1.56
LSM5-206ENST00000409987 SCFD2Q8WU76 684 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 SNX21Q969T3 373 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 PABPC5Q96DU9 382 aaKnown RBP5.33□□□□□ -1.56
LSM5-206ENST00000409987 WDFY2Q96P53 400 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 STRA6Q9BX79 667 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 FTOQ9C0B1 505 aaKnown RBP eCLIP5.33□□□□□ -1.56
LSM5-206ENST00000409987 PRSS22Q9GZN4 317 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 C2orf40Q9H1Z8 148 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 MSRB1Q9NZV6 116 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 SEL1LQ9UBV2 794 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 ZNF70Q9UC06 446 aaPredicted RBP5.33□□□□□ -1.56
LSM5-206ENST00000409987 GTF3C4Q9UKN8 822 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 ADAM18Q9Y3Q7 739 aa5.33□□□□□ -1.56
LSM5-206ENST00000409987 GPRASP1Q5JY77 1395 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 FLT1P17948 1338 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 A0A096LPK6 155 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 FAM237BA0A1B0GVD1 139 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 CGB1A6NKQ9 187 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 LRRC53A6NM62 1247 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 KCNU1A8MYU2 1149 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 HSPB6O14558 160 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 KIF1CO43896 1103 aaKnown RBP5.32□□□□□ -1.56
LSM5-206ENST00000409987 PAGE4O60829 102 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 CNOT3O75175 753 aaKnown RBP5.32□□□□□ -1.56
LSM5-206ENST00000409987 CSPG5O95196 566 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 TFP02787 698 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 EIF2S1P05198 315 aaKnown RBP5.32□□□□□ -1.56
LSM5-206ENST00000409987 CHRNB1P11230 501 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 PTGER1P34995 402 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 ATP6V1E1P36543 226 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 GPR12P47775 334 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 CXCR3P49682 368 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 TMPRSS3P57727 454 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 KYNUQ16719 465 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 BMP2KLQ5H9B9 411 aa5.32□□□□□ -1.56
LSM5-206ENST00000409987 LRRC8EQ6NSJ5 796 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms