RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 SORCS3Q9UPU3 1222 aa4.89□□□□□ -1.63
R3HDM1-203ENST00000409606 COMMD10Q9Y6G5 202 aa4.89□□□□□ -1.63
R3HDM1-203ENST00000409606 KCNN4O15554 427 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 SMAD6O43541 496 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 TULP3O75386 442 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 GJB3O75712 270 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 NDST3O95803 873 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CHRNB1P11230 501 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 ALOX15P16050 662 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 ZNF30P17039 623 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 ADRA1DP25100 572 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 ELF1P32519 619 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CETN2P41208 172 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CTSOP43234 321 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CSE1LP55060 971 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CDH17Q12864 832 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 SIM2Q14190 667 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 STAT4Q14765 748 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CRYMQ14894 314 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 MYLK3Q32MK0 819 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 PREPLQ4J6C6 727 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 BCL7AQ4VC05 210 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 PCID2Q5JVF3 399 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 AGBL4Q5VU57 503 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 ZDHHC20Q5W0Z9 365 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 NEK5Q6P3R8 708 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CROCCP2Q86T23 111 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 PRUNE1Q86TP1 453 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 FBXO15Q8NCQ5 510 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 OR2AP1Q8NGE2 309 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 FAM149B1Q96BN6 582 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 GPR22Q99680 433 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 ATXN3LQ9H3M9 355 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 NOD2Q9HC29 1040 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 MED4Q9NPJ6 270 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 INTS10Q9NVR2 710 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 NOVA2Q9UNW9 492 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 NUMBLQ9Y6R0 609 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 TCRBV9S1A1TA0A576 114 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 TMEM110-MUSTN1A8MSY1 372 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 SPECC1L-ADORA2AF8WAN1 911 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 SPATA31D3P0C874 917 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 DRD1P21728 446 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 FDXRP22570 491 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 OR1E1P30953 314 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CA5AP35218 305 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 TRIM23P36406 574 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 GRIA1P42261 906 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 MAGEA4P43358 317 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 NUMBP49757 651 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 ECT2LQ008S8 904 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CTBSQ01459 385 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 SLC7A5Q01650 507 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 PTSQ03393 145 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 DHX9Q08211 1270 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 DNAJC21Q5F1R6 531 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 TSTD2Q5T7W7 516 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 BRAT1Q6PJG6 821 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 KDM7AQ6ZMT4 941 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 SPATA31D4Q6ZUB0 917 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CIR1Q86X95 450 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CPA6Q8N4T0 437 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 GSDMBQ8TAX9 411 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 RAB3IL1Q8TBN0 382 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CCDC110Q8TBZ0 833 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 NETO1Q8TDF5 533 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 USP33Q8TEY7 942 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 RAB7BQ96AH8 199 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 MENTQ9BUN1 341 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 C2orf49Q9BVC5 232 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CALN1Q9BXU9 219 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 DUS2Q9NX74 493 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 UBA2Q9UBT2 640 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 FBXO4Q9UKT5 387 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 PHTF1Q9UMS5 762 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 SPO11Q9Y5K1 396 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 PCM1Q15154 2024 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 EDDM13A0A1B0GTR0 161 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 H3BQF6 201 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CHUKO15111 745 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 SHBGP04278 402 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 DLDP09622 509 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 C1SP09871 688 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 HADHAP40939 763 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 INSCQ1MX18 579 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 MAP7D1Q3KQU3 841 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CARD16Q5EG05 197 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 LY6G5CQ5SRR4 150 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 RARS2Q5T160 578 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 CCDC181Q5TID7 509 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 RNF219Q5W0B1 726 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 FAM117BQ6P1L5 589 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 ADAMTSL4Q6UY14 1074 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 NEK10Q6ZWH5 1172 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 TRABD2AQ86V40 505 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 MIB1Q86YT6 1006 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 LRRC34Q8IZ02 419 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 MAML2Q8IZL2 1156 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 BANPQ8N9N5 519 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 HHIPQ96QV1 700 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms