RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 CDT1Q9H211 546 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 KLHL31Q9H511 634 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 MAGEE1Q9HCI5 957 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 EHD2Q9NZN4 543 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 C11orf21Q9P2W6 132 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 HAO1Q9UJM8 370 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 CACNA1IQ9P0X4 2223 aa2.84□□□□□ -1.95
CUL3-203ENST00000409096 A0A096LPK6 155 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 A0A1W2PQ09 198 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 FRMD3A2A2Y4 597 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 PRPF4O43172 522 aaKnown RBP eCLIP2.84□□□□□ -1.96
CUL3-203ENST00000409096 MT-CYBP00156 380 aaPredicted RBP2.84□□□□□ -1.96
CUL3-203ENST00000409096 FGF2P09038 288 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 AKR1B1P15121 316 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 ZNF8P17098 575 aaPredicted RBP2.84□□□□□ -1.96
CUL3-203ENST00000409096 PTPN2P17706 415 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 TNFRSF1BP20333 461 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 MCM3P25205 808 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 PSMA4P25789 261 aaKnown RBP2.84□□□□□ -1.96
CUL3-203ENST00000409096 GCH1P30793 250 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 EIF2S3P41091 472 aaKnown RBP2.84□□□□□ -1.96
CUL3-203ENST00000409096 P2RX3P56373 397 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 SNX16P57768 344 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 TRAF1Q13077 416 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 RBMS2Q15434 407 aaKnown RBP2.84□□□□□ -1.96
CUL3-203ENST00000409096 RILPL1Q5EBL4 403 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 SGO1Q5FBB7 561 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 MTX3Q5HYI7 312 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 CRELD2Q6UXH1 353 aaPredicted RBP2.84□□□□□ -1.96
CUL3-203ENST00000409096 CHST9Q7L1S5 443 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 GALNT5Q7Z7M9 940 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 DENND6AQ8IWF6 608 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 CCDC89Q8N998 374 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 NOC3LQ8WTT2 800 aaKnown RBP2.84□□□□□ -1.96
CUL3-203ENST00000409096 PPP1R13BQ96KQ4 1090 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 BPIFA1Q9NP55 256 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 RNF146Q9NTX7 359 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 ANKEF1Q9NU02 776 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 SETD4Q9NVD3 440 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 CISD1Q9NZ45 108 aaKnown RBP2.84□□□□□ -1.96
CUL3-203ENST00000409096 CARD8Q9Y2G2 431 aa2.84□□□□□ -1.96
CUL3-203ENST00000409096 RAPGEF6Q8TEU7 1601 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 FAM237AA0A1B0GTK4 181 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 H3BQ06 376 aaPredicted RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 CNOT3O75175 753 aaKnown RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 CSH1P0DML2 217 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 CSH2P0DML3 217 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 PRF1P14222 555 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 ALOX12P18054 663 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 AGAP20933 346 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 UBA7P41226 1012 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 RAD52P43351 418 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 PMS2P54278 862 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 CDH8P55286 799 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 SORDQ00796 357 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 NUCB1Q02818 461 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 CUL4AQ13619 759 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 ARHGEF6Q15052 776 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 ASTE1Q2TB18 679 aaPredicted RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 DPCR1Q3MIW9 517 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 MMEL1Q495T6 779 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 DUSP28Q4G0W2 176 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 PLEKHO1Q53GL0 409 aaPredicted RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 ANKRD54Q6NXT1 300 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 CPLX2Q6PUV4 134 aaKnown RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 ZBTB2Q8N680 514 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 NEXN-AS1Q8NBZ9 246 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 MCPH1Q8NEM0 835 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 HUS1BQ8NHY5 278 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 ARRDC2Q8TBH0 407 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 MSTO1Q9BUK6 570 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 SLC28A3Q9HAS3 691 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 LYVE1Q9Y5Y7 322 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 PCF11O94913 1555 aaKnown RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 C1orf226A1L170 272 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 C17orf102A2RUQ5 167 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 H0YGN5 161 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 J3KR12 359 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 TAF4O00268 1085 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 TIMM23O14925 209 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 EPN2O95208 641 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 CYC1P08574 325 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 CDAP32320 146 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 CDH12P55289 794 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 NANOS3P60323 173 aaKnown RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 FAM27E3Q08E93 113 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 GOLGA8DPQ0D2H9 430 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 ACVR2BQ13705 512 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 HNF4GQ14541 408 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 LPIN1Q14693 890 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 DRAP1Q14919 205 aaPredicted RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 WTAPQ15007 396 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 ETFDHQ16134 617 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 HIST2H2ACQ16777 129 aaPredicted RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 DUSP6Q16828 381 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 DEF8Q6ZN54 512 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 SLC16A12Q6ZSM3 486 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 TMC8Q8IU68 726 aa2.83□□□□□ -1.96
CUL3-203ENST00000409096 MB21D2Q8IYB1 491 aaPredicted RBP2.83□□□□□ -1.96
CUL3-203ENST00000409096 FAM185AQ8N0U4 392 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms