RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 PAAF1Q9BRP4 392 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 TUBB2BQ9BVA1 445 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 TMEM120AQ9BXJ8 343 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 HDHD5Q9BXW7 423 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 PCDHAC1Q9H158 963 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 SLC25A18Q9H1K4 315 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 MVB12BQ9H7P6 319 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 C1RLQ9NZP8 487 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 ZDHHC2Q9UIJ5 367 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 ZBTB1Q9Y2K1 713 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 SNX13Q9Y5W8 968 aa1.32□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3DA0A087WVF3 549 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3IA0A087WXS9 549 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3EA0A087X179 549 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3KA0A087X1G2 549 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 ANKRD62A6NC57 917 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3BA6NDS4 549 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3FA6NER0 549 aaPredicted RBP1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 POM121BA6NF01 834 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 VSTM5A8MXK1 200 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3LB9A6J9 549 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 PCDH17O14917 1159 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 AREL1O15033 823 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 HLA-DQA2P01906 255 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3HP0C7X1 549 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 UBA1P22314 1058 aaKnown RBP1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 GABRB3P28472 473 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 GNL1P36915 607 aaPredicted RBP1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 MS4A2Q01362 244 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBL3Q12788 808 aaKnown RBP1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 RAPSNQ13702 412 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 LPIN1Q14693 890 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 EFNB3Q15768 340 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 KLHDC7AQ5VTJ3 777 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TMEM268Q5VZI3 342 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3GQ6DHY5 549 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3CQ6IPX1 549 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 BEND5Q7L4P6 421 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 DGKHQ86XP1 1220 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 TBC1D3Q8IZP1 549 aaPredicted RBP1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 Q8N377 158 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 CCDC33Q8N5R6 958 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 ZNF614Q8N883 585 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 RNF152Q8N8N0 203 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 CCDC150Q8NCX0 1101 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 PARD3BQ8TEW8 1205 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 HDAC7Q8WUI4 952 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 APOL5Q9BWW9 433 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 NUP62CLQ9H1M0 184 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 MYO1AQ9UBC5 1043 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 FBXO40Q9UH90 709 aa1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 ZMYND8Q9ULU4 1186 aaPredicted RBP1.31□□□□□ -2.2
MIR548I3-201ENST00000408378 A0A096LPK6 155 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 LOC105369274A0A096LPK9 316 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 LOC102723532A0A0G2JNH3 316 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 KPNA5O15131 536 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 NDUFS7O75251 213 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 TAF5LO75529 589 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 NDST3O95803 873 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 TFRCP02786 760 aaKnown RBP1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 CEACAM1P13688 526 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 HOXB9P17482 250 aaPredicted RBP1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 EFNA5P52803 228 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 SPOCK1Q08629 439 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 FAM27E3Q08E93 113 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 ZNF543Q08ER8 600 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 GPRIN3Q6ZVF9 776 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 OR4N4Q8N0Y3 316 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 ZIM3Q96PE6 472 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 FRG2BQ96QU4 278 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 SOSTQ9BQB4 213 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 COLEC11Q9BWP8 271 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 BICC1Q9H694 974 aaKnown RBP1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 PRDM8Q9NQV8 689 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 RGL1Q9NZL6 768 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 EPHA6Q9UF33 1036 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 CA14Q9ULX7 337 aa1.3□□□□□ -2.2
MIR548I3-201ENST00000408378 KIAA1210Q9ULL0 1709 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 TAF1P21675 1872 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 IGLV7-46A0A075B6I9 117 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 PNMA6EA0A0J9YXQ4 647 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 FAM234BA2RU67 622 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 GOLGA6CA6NDK9 693 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 GOLGA6BA6NDN3 693 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 APOL1O14791 398 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 TSPAN6O43657 245 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 RPP40O75818 363 aaKnown RBP1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 CER1O95813 267 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 GLP2RO95838 553 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 S100BP04271 92 aaPredicted RBP1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 GOLGA6DP0CG33 693 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 GSTM2P28161 218 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 BMXP51813 675 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 CASP5P51878 434 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 TERF1P54274 439 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 OAZ1P54368 228 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 FAM3BP58499 235 aaPredicted RBP1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 IGBP1P78318 339 aa1.29□□□□□ -2.2
MIR548I3-201ENST00000408378 PMS2P11Q13670 270 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms