RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 RP1P56715 2156 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 AQP9O43315 295 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 GCATO75600 419 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 PEX11BO96011 259 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 EIF4A3P38919 411 aaKnown RBP19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 YPEL5P62699 121 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 BCL2L1Q07817 233 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 PTK2BQ14289 1009 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 LRRC14Q15048 493 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 DEFB133Q30KQ1 61 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 TMCO4Q5TGY1 634 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 CPNE8Q86YQ8 564 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 FAM181AQ8N9Y4 354 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 TEKT4Q8WW24 435 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 RFFLQ8WZ73 363 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 ECHDC3Q96DC8 303 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 DUSP23Q9BVJ7 150 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 SEPT3Q9UH03 358 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 NENFQ9UMX5 172 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 GPSM3Q9Y4H4 160 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 CSNK1G3Q9Y6M4 447 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 TRAFD1O14545 582 aaPredicted RBP19.42■□□□□ 0.7
SMARCB1-204ENST00000407422 PTMSP20962 102 aa19.42■□□□□ 0.7
SMARCB1-204ENST00000407422 C1orf61Q13536 156 aa19.42■□□□□ 0.7
SMARCB1-204ENST00000407422 C19orf48Q6RUI8 117 aa19.42■□□□□ 0.7
SMARCB1-204ENST00000407422 NYAP1Q6ZVC0 841 aa19.42■□□□□ 0.7
SMARCB1-204ENST00000407422 PHACTR4Q8IZ21 702 aa19.42■□□□□ 0.7
SMARCB1-204ENST00000407422 APOBEC3BQ9UH17 382 aaKnown RBP19.42■□□□□ 0.7
SMARCB1-204ENST00000407422 CLCA2Q9UQC9 943 aa19.42■□□□□ 0.7
SMARCB1-204ENST00000407422 LRP4O75096 1905 aa19.42■□□□□ 0.7
SMARCB1-204ENST00000407422 MYO1FO00160 1098 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 MAFKO60675 156 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 CD48P09326 243 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 IL4RP24394 825 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 E2F1Q01094 437 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 RALGDSQ12967 914 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 MMRN1Q13201 1228 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 PRRT3Q5FWE3 981 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 MACC1Q6ZN28 852 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 PGBD5Q8N414 524 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 ZNF599Q96NL3 588 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 LRRC61Q9BV99 259 aa19.41■□□□□ 0.7
SMARCB1-204ENST00000407422 LZTS3O60299 673 aaPredicted RBP19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 HNRNPH3P31942 346 aaKnown RBP19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 SSR1P43307 286 aaKnown RBP19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 CDH6P55285 790 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 INPP5AQ14642 412 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 CDKN3Q16667 212 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 ATP13A4Q4VNC1 1196 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 FAXCQ5TGI0 409 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 ZCCHC8Q6NZY4 707 aaKnown RBP19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 PAF1Q8N7H5 531 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 DCBLD1Q8N8Z6 715 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 ZNF564Q8TBZ8 553 aaPredicted RBP19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 BTN2A2Q8WVV5 523 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 PACSIN1Q9BY11 444 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 SPASTQ9UBP0 616 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 LHX6Q9UPM6 363 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 OR1A2Q9Y585 309 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 A8MX80 341 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 OPA1O60313 960 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 MT-CO3P00414 261 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 PCCBP05166 539 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 CELA2BP08218 269 aaPredicted RBP19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 RENBPP51606 427 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 ADKP55263 362 aaKnown RBP19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 AP1S1P61966 158 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 PPARDQ03181 441 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 KRT81Q14533 505 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 ZNF235Q14590 738 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 AGERQ15109 404 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 PLA2G15Q8NCC3 412 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 TSACCQ96A04 125 aaPredicted RBP19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 NXPE2Q96DL1 559 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 IL12RB2Q99665 862 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 SLC13A1Q9BZW2 595 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 CLPBQ9H078 707 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 PCDHGC4Q9Y5F7 938 aa19.4■□□□□ 0.7
SMARCB1-204ENST00000407422 CACNA1GO43497 2377 aa19.39■□□□□ 0.7
SMARCB1-204ENST00000407422 BPTFQ12830 3046 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 SMG1Q96Q15 3661 aaKnown RBP19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 TOR1BO14657 336 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 TSHRP16473 764 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 CR2P20023 1033 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 TCEA2Q15560 299 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 GUSBP11Q6P575 273 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 LIPIQ6XZB0 460 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 CACTIN-AS1Q8N1I8 211 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 ATPAF2Q8N5M1 289 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 FAM71BQ8TC56 605 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 IFI44Q8TCB0 444 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 HNRNPLLQ8WVV9 542 aaKnown RBP19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 APOOQ9BUR5 198 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 NOD2Q9HC29 1040 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 AK5Q9Y6K8 562 aa19.39■□□□□ 0.69
SMARCB1-204ENST00000407422 CPED1A4D0V7 1026 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 TPP1O14773 563 aa19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 RECQL5O94762 991 aaPredicted RBP19.38■□□□□ 0.69
SMARCB1-204ENST00000407422 TPM3P06753 285 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms