RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 DNAJC1Q96KC8 554 aaKnown RBP24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 TBATAQ96M53 351 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 TMEM237Q96Q45 408 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 SORT1Q99523 831 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 FAM96AQ9H5X1 160 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 OXSMQ9NWU1 459 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 RIMKLBQ9ULI2 386 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 RPP40O75818 363 aaKnown RBP24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 KLHL2O95198 593 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 KPNA2P52292 529 aaKnown RBP24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 PRKAA2P54646 552 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 RBM20Q5T481 1227 aaKnown RBP24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 HS6ST3Q8IZP7 471 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 FSTL5Q8N475 847 aaPredicted RBP24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 KLHL23Q8NBE8 558 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 STYXQ8WUJ0 223 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 NSL1Q96IY1 281 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 NUDCD1Q96RS6 583 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 NDNQ99608 321 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 PNPOQ9NVS9 261 aa24.8■■□□□ 1.56
DNMT3A-206ENST00000406659 OR51F1A6NGY5 319 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 TK2O00142 265 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 BUD23O43709 281 aaKnown RBP24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 GREM1O60565 184 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 SNAP91O60641 907 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 CCDC22O60826 627 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 LUC7L3O95232 432 aaKnown RBP24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 CRTAMO95727 393 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 HSPA4LO95757 839 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 GLP2RO95838 553 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 FGBP02675 491 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 KRT16P08779 473 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 HTRA4P83105 476 aaPredicted RBP24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 KRT72Q14CN4 511 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 FSCBQ5H9T9 825 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 GAREM2Q75VX8 874 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 ELMOD1Q8N336 334 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 MAB21L3Q8N8X9 362 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 ARL8BQ9NVJ2 186 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 VPS28Q9UK41 221 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 STK38LQ9Y2H1 464 aa24.79■■□□□ 1.56
DNMT3A-206ENST00000406659 MGRN1O60291 552 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 TMCC1O94876 653 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 S1PR4O95977 384 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 ADH1AP07327 375 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 MZF1P28698 734 aaPredicted RBP24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 ARF5P84085 180 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 NSUN2Q08J23 767 aaKnown RBP eCLIP24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 ILF2Q12905 390 aaKnown RBP24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 LINGO4Q6UY18 593 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 NAPRTQ6XQN6 538 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 TMEM151AQ8N4L1 468 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 TTC8Q8TAM2 541 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 PRR11Q96HE9 360 aaPredicted RBP24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 NSMCE3Q96MG7 304 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 FEM1AQ9BSK4 669 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 NMUR2Q9GZQ4 415 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 STN1Q9H668 368 aaKnown RBP24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 SUDS3Q9H7L9 328 aaPredicted RBP24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 MARCH4Q9P2E8 410 aaPredicted RBP24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 LNPEPQ9UIQ6 1025 aa24.78■■□□□ 1.56
DNMT3A-206ENST00000406659 GOT2P00505 430 aaKnown RBP24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 CKMP06732 381 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 ARRB2P32121 409 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 ZXDBP98169 803 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 CDH18Q13634 790 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 PTPRCAPQ14761 206 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 HECTD2Q5U5R9 776 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 LIPMQ5VYY2 423 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 FAM91A1Q658Y4 838 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 MRNIPQ6NTE8 343 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 LILRA6Q6PI73 481 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 TTC7BQ86TV6 843 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 LDB1Q86U70 411 aaPredicted RBP24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 OR13C4Q8NGS5 318 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 SLC7A6OSQ96CW6 309 aaPredicted RBP24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 GPR78Q96P69 363 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 GATA5Q9BWX5 397 aaPredicted RBP24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 PTPRSQ13332 1948 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 CCDC162PA2VCL2 907 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 CD3EAPO15446 510 aaKnown RBP24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 ZMPSTE24O75844 475 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 C8AP07357 584 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 SBK3P0C264 359 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 PTPN4P29074 926 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 DLG1Q12959 904 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 SPATA6LQ8N4H0 392 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 KREMEN2Q8NCW0 462 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 GPR150Q8NGU9 434 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 SCG3Q8WXD2 468 aaKnown RBP24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 GCNAQ96QF7 691 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 OLFM1Q99784 485 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 TMEM106CQ9BVX2 250 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 TDRD1Q9BXT4 1180 aaKnown RBP24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 XPR1Q9UBH6 696 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 ZNF510Q9Y2H8 683 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms