RNA–Protein interactions for RNA: ENST00000402203.5

TNRC6B-203, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNRC6B, Length 3,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-203ENST00000402203 MTMR11A4FU01 709 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 RAG1P15918 1043 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 XRCC1P18887 633 aaPredicted RBP13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 CDK7P50613 346 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 RENBPP51606 427 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 SCIMPQ6UWF3 145 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 MYLK4Q86YV6 388 aaPredicted RBP13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 ZNF683Q8IZ20 524 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 C2CD4AQ8NCU7 369 aaPredicted RBP13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 ARRDC2Q8TBH0 407 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 CMTM5Q96DZ9 223 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 EBF3Q9H4W6 596 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 CCDC167Q9P0B6 97 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 GALPQ9UBC7 116 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 PTPRDP23468 1912 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 CCDC189A1A4V9 331 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 TXNDC9O14530 226 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 TYMPP19971 482 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 THOP1P52888 689 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 MRPS22P82650 360 aaKnown RBP13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 MS4A2Q01362 244 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 SFT2D3Q587I9 215 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 SDCCAG8Q86SQ7 713 aaPredicted RBP13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 EFHBQ8N7U6 833 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 KDM1BQ8NB78 822 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 PCSK9Q8NBP7 692 aaKnown RBP13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 PRDM16Q9HAZ2 1276 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 COPG1Q9Y678 874 aaKnown RBP13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 GREB1Q4ZG55 1949 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 MIA3Q5JRA6 1907 aa13.39□□□□□ -0.27
TNRC6B-203ENST00000402203 UBFD1O14562 309 aaKnown RBP13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 ENPP3O14638 875 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 GOT2P00505 430 aaKnown RBP13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 ATF6P18850 670 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 GEN1Q17RS7 908 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 PLA2G4EQ3MJ16 856 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 POTEHQ6S545 545 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 DSELQ8IZU8 1212 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 PPFIBP2Q8ND30 876 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 PTERQ96BW5 349 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 RMDN1Q96DB5 314 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 IFT43Q96FT9 208 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 MRPL46Q9H2W6 279 aaKnown RBP13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 PRDM5Q9NQX1 630 aaPredicted RBP13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 MARCH5Q9NX47 278 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 ZFP37Q9Y6Q3 630 aaPredicted RBP13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 ZNF236Q9UL36 1845 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 EYSQ5T1H1 3165 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 CCDC162PA2VCL2 907 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 A8MT66 165 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 CBX4O00257 560 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 CABYRO75952 493 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 ALDH2P05091 517 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 DNAJB2P25686 324 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 OR1D2P34982 312 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 CCNG1P51959 295 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 INHBEP58166 350 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 RALGDSQ12967 914 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 ZNF235Q14590 738 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 TRIP10Q15642 601 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 PIDD1Q9HB75 910 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 S100A14Q9HCY8 104 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 CDYLQ9Y232 598 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 PCDHB7Q9Y5E2 793 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 SPO11Q9Y5K1 396 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 HOXC13P31276 330 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 BLMHQ13867 455 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 LBRQ14739 615 aaKnown RBP13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 FAM91A1Q658Y4 838 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 TIGD7Q6NT04 549 aaPredicted RBP13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 ZNF549Q6P9A3 640 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 SREK1Q8WXA9 508 aaKnown RBP13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 PCDHAC1Q9H158 963 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 MMADHCQ9H3L0 296 aaPredicted RBP13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 PCDHGB4Q9UN71 923 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 ARHGAP26Q9UNA1 814 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 VWA7Q9Y334 891 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 PCDHGB5Q9Y5G0 923 aa13.38□□□□□ -0.27
TNRC6B-203ENST00000402203 ENO4A6NNW6 628 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 DNAJA2O60884 412 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 LMNAP02545 664 aaKnown RBP13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 LINGO3P0C6S8 592 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 FMO4P31512 558 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 FOXA1P55317 472 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 AP2B1P63010 937 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 YBX1P67809 324 aaKnown RBP13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 HNRNPDQ14103 355 aaKnown RBP13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 TRMT5Q32P41 509 aaKnown RBP13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 MAP3K21Q5TCX8 1036 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 AFMIDQ63HM1 303 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 CAPRIN2Q6IMN6 1127 aaKnown RBP13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 FUT10Q6P4F1 479 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 CILP2Q8IUL8 1156 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 LZTR1Q8N653 840 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 CCDC97Q96F63 343 aaPredicted RBP13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 SARS2Q9NP81 518 aaKnown RBP13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 TLR9Q9NR96 1032 aa13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 UTP6Q9NYH9 597 aaKnown RBP13.37□□□□□ -0.27
TNRC6B-203ENST00000402203 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.37□□□□□ -0.271e-8■■■■■ 28.1
TNRC6B-203ENST00000402203 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms