RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 SUPT3HO75486 399 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 CNTN5O94779 1100 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 LTA4HP09960 611 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 CD1EP15812 388 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 DNAJB2P25686 324 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 GABRB3P28472 473 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 CYP2C18P33260 490 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 ZNF135P52742 658 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 USP46P62068 366 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 CDK18Q07002 472 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 DLG1Q12959 904 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 TUBB3Q13509 450 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 CCNIQ14094 377 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 GALNT3Q14435 633 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 BRMS1LQ5PSV4 323 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 FAM171A1Q5VUB5 890 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 FAM91A1Q658Y4 838 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PIWIL4Q7Z3Z4 852 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 BBS5Q8N3I7 341 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 ATP6V0D2Q8N8Y2 350 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 MRPL57Q9BQC6 102 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 TRMT13Q9NUP7 481 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 GMIPQ9P107 970 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 SUN2Q9UH99 717 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 ABT1Q9ULW3 272 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 SLC45A1Q9Y2W3 748 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 VWA7Q9Y334 891 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 KCTD3Q9Y597 815 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 SNX13Q9Y5W8 968 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 HS3ST4Q9Y661 456 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 TLL2Q9Y6L7 1015 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 SUPT3HB4E1H0 165 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 MAFKO60675 156 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 GLP2RO95838 553 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 RBP1P09455 135 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 ARSAP15289 507 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 VCLP18206 1134 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 RPL34P49207 117 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PGFP49763 221 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 FOLH1Q04609 750 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 RALGDSQ12967 914 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 STX5Q13190 355 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 ITGA7Q13683 1181 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 XKR4Q5GH76 650 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 KCTD11Q693B1 232 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 KRT80Q6KB66 452 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PQLC1Q8N2U9 271 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 TXNDC5Q8NBS9 432 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PHC3Q8NDX5 983 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 IRGQQ8WZA9 623 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 TUBGCP3Q96CW5 907 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 NMD3Q96D46 503 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PRKD2Q9BZL6 878 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 OSBPL2Q9H1P3 480 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 UTP6Q9NYH9 597 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 MARCH2Q9P0N8 246 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 SIP14410 1827 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 HAS3O00219 553 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PSMD12O00232 456 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 NR5A2O00482 541 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 AKAP10O43572 662 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 MGEA5O60502 916 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 CAPN15O75808 1086 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 RHOBTB1O94844 696 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 IRF1P10914 325 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 HOXD8P13378 290 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 UQCRBP14927 111 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 FLT3LGP49771 235 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PDK3Q15120 406 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 KCNA10Q16322 511 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PFKFB4Q16877 469 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 HECTD2Q5U5R9 776 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PIM3Q86V86 326 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 CENPLQ8N0S6 344 aaPredicted RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 NUP93Q8N1F7 819 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 RTL3Q8N8U3 475 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 RDH11Q8TC12 318 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 STYXQ8WUJ0 223 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 ATP6V1E2Q96A05 226 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 ZYG11BQ9C0D3 744 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 PCDHAC1Q9H158 963 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 UPF3AQ9H1J1 476 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 COPG1Q9Y678 874 aaKnown RBP7.74□□□□□ -1.17
HDAC9-201ENST00000401921 V9GYQ6 96 aa7.74□□□□□ -1.17
HDAC9-201ENST00000401921 CCNT2O60583 730 aaKnown RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 RNASEH1O60930 286 aaKnown RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 NDUFS3O75489 264 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 HAPLN1P10915 354 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-201ENST00000401921 SLC2A3P11169 496 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 NAT1P18440 290 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PRKAA2P54646 552 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PSME3P61289 254 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 ADAM17P78536 824 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PLIN5Q00G26 463 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 POU4F1Q01851 419 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 SEMA3BQ13214 749 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 GSTA3Q16772 222 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 ALFQ53S48 1182 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PITRM1Q5JRX3 1037 aa7.73□□□□□ -1.17
HDAC9-201ENST00000401921 PM20D1Q6GTS8 502 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms