RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 CRY1Q16526 586 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 TYSND1Q2T9J0 566 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 ANO7Q6IWH7 933 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 VSTM1Q6UX27 236 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 NUDT18Q6ZVK8 323 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 WDR48Q8TAF3 677 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 SERPINB11Q96P15 392 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 PHF12Q96QT6 1004 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 COLEC11Q9BWP8 271 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 POLR1EQ9GZS1 481 aaKnown RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 ARL15Q9NXU5 204 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 SNX6Q9UNH7 406 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 STXBP5LQ9Y2K9 1186 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 ARHGAP23Q9P227 1491 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 JCADQ9P266 1359 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 TP73O15350 636 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 EGFRP00533 1210 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 DARSP14868 501 aaKnown RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 RNASEH2BQ5TBB1 312 aaKnown RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 CBR4Q8N4T8 237 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 OR5B17Q8NGF7 314 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 MCOLN3Q8TDD5 553 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 AP3S1Q92572 193 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 QKIQ96PU8 341 aaKnown RBP eCLIP8.68□□□□□ -1.022e-8■■□□□ 14.5
CTNND1-205ENST00000399050 SMPD3Q9NY59 655 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 U3KQV3 271 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 FAM149AA5PLN7 773 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 ACLYP53396 1101 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 EVX2Q03828 476 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 LGALS3BPQ08380 585 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 GRIK4Q16099 956 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 SLC27A1Q6PCB7 646 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 ZDHHC24Q6UX98 284 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 MON1BQ7L1V2 547 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 TAMM41Q96BW9 452 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 LENG8Q96PV6 779 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 COQ10BQ9H8M1 238 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 ATP13A1Q9HD20 1204 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 RNF181Q9P0P0 153 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 POLR3HQ9Y535 204 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 SPACA6W5XKT8 324 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 NEURL4Q96JN8 1562 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 FGF10O15520 208 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 S100A9P06702 114 aaKnown RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 RAB27AP51159 221 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 PRKG2Q13237 762 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 INTS11Q5TA45 600 aaKnown RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 SPATA19Q7Z5L4 167 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 CNTD1Q8N815 330 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 AGBL3Q8NEM8 1001 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 PNPLA8Q9NP80 782 aa8.68□□□□□ -1.02
CTNND1-205ENST00000399050 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.68□□□□□ -1.023e-6■■□□□ 12.8
CTNND1-205ENST00000399050 RIMS1Q86UR5 1692 aaKnown RBP8.68□□□□□ -1.02
CTNND1-205ENST00000399050 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-205ENST00000399050 BCKDKO14874 412 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 SEMA3DO95025 777 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 STAT5AP42229 794 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 CERCAMQ5T4B2 595 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 ATAD3BQ5T9A4 648 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 ZYG11AQ6WRX3 759 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 FAM43BQ6ZT52 329 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-205ENST00000399050 LGI2Q8N0V4 545 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 STK40Q8N2I9 435 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 TCAIMQ8N3R3 496 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 UBR7Q8N806 425 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 BANPQ8N9N5 519 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 REPS2Q8NFH8 660 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 PARK7Q99497 189 aaKnown RBP8.67□□□□□ -1.02
CTNND1-205ENST00000399050 PCDH18Q9HCL0 1135 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 ZDHHC18Q9NUE0 388 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 TRPM5Q9NZQ8 1165 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 POMPQ9Y244 141 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-205ENST00000399050 LYVE1Q9Y5Y7 322 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 STX11O75558 287 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 FARP2O94887 1054 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-205ENST00000399050 TPSB2P20231 275 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 ITGAXP20702 1163 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 CDKN2BP42772 138 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 ACSM2AQ08AH3 577 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 TPSAB1Q15661 275 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 ACSM2BQ68CK6 577 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 RAB43Q86YS6 212 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 ANKRD13AQ8IZ07 590 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 SUN5Q8TC36 379 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 ITCHQ96J02 903 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 RBM4BQ9BQ04 359 aaKnown RBP8.67□□□□□ -1.02
CTNND1-205ENST00000399050 KIFC1Q9BW19 673 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 RBM4Q9BWF3 364 aaKnown RBP8.67□□□□□ -1.02
CTNND1-205ENST00000399050 FBXO44Q9H4M3 255 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 CCDC59Q9P031 241 aaKnown RBP8.67□□□□□ -1.02
CTNND1-205ENST00000399050 PMF1-BGLAPU3KQ54 211 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 THRBP10828 461 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 ITGA2P17301 1181 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 RPS9P46781 194 aaKnown RBP8.67□□□□□ -1.02
CTNND1-205ENST00000399050 DLG2Q15700 870 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 C5orf22Q49AR2 442 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 GLYATQ6IB77 296 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 PMF1Q6P1K2 205 aa8.67□□□□□ -1.02
CTNND1-205ENST00000399050 TXNDC11Q6PKC3 985 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms