RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 MAP3K6O95382 1288 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
VPREB3-202ENST00000398465 CPP00450 1065 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 C6P13671 934 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 TGM2P21980 687 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 CA4P22748 312 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 CES1P23141 567 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 PMLP29590 882 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 NR2C2P49116 596 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 IFI35P80217 286 aaPredicted RBP12.86□□□□□ -0.35
VPREB3-202ENST00000398465 RALGDSQ12967 914 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 TFDP2Q14188 446 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 PDK1Q15118 436 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 SHBQ15464 509 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 PPP2R5EQ16537 467 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 TFDP3Q5H9I0 405 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 SPOCD1Q6ZMY3 1216 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 DPPA4Q7L190 304 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 KIAA1328Q86T90 577 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 RFX6Q8HWS3 928 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 SLC22A18ASQ8N1D0 253 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 PAF1Q8N7H5 531 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 ACRBPQ8NEB7 543 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 OR13H1Q8NG92 308 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 EXD1Q8NHP7 514 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
VPREB3-202ENST00000398465 CDC6Q99741 560 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 WRAP53Q9BUR4 548 aaKnown RBP12.86□□□□□ -0.35
VPREB3-202ENST00000398465 GOLPH3Q9H4A6 298 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 NOD2Q9HC29 1040 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 CA5BQ9Y2D0 317 aa12.86□□□□□ -0.35
VPREB3-202ENST00000398465 PTPRBP23467 1997 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 CEP295Q9C0D2 2601 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 MMP20O60882 483 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 NEBLO76041 1014 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 PGLSO95336 258 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 CCNB1P14635 433 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 IGFALSP35858 605 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 CLDN2P57739 230 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 PFN3P60673 137 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 MAXP61244 160 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 IL9RQ01113 521 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 SLC10A2Q12908 348 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-202ENST00000398465 TRAF2Q12933 501 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 N4BP2L1Q5TBK1 243 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-202ENST00000398465 MFSD7Q6UXD7 560 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 BZW1Q7L1Q6 419 aaKnown RBP12.85□□□□□ -0.35
VPREB3-202ENST00000398465 PARGQ86W56 976 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 TP53I13Q8NBR0 393 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-202ENST00000398465 CCNYQ8ND76 341 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 SAP25Q8TEE9 199 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 SETD7Q8WTS6 366 aaKnown RBP12.85□□□□□ -0.35
VPREB3-202ENST00000398465 CENPTQ96BT3 561 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 MCCC1Q96RQ3 725 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-202ENST00000398465 SEMA3CQ99985 751 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 SALL4Q9UJQ4 1053 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 HEY1Q9Y5J3 304 aa12.85□□□□□ -0.35
VPREB3-202ENST00000398465 ARID1BQ8NFD5 2236 aaPredicted RBP12.85□□□□□ -0.35
VPREB3-202ENST00000398465 hCG_1818297A0A087WSY0 165 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 POM121BA6NF01 834 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 PSMD11O00231 422 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 KCNK3O14649 394 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 FZD6O60353 706 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPREB3-202ENST00000398465 TRIM16O95361 564 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 HLA-DQB2P05538 268 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 ITGAVP06756 1048 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 ELFN1P0C7U0 828 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 TNNT1P13805 278 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 CTNNA2P26232 953 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 MARCKSL1P49006 195 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 LIG3P49916 1009 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 COPS2P61201 443 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 YPEL5P62699 121 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 SIM1P81133 766 aaPredicted RBP12.84□□□□□ -0.35
VPREB3-202ENST00000398465 SHC2P98077 582 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 KIF5AQ12840 1032 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 IRF4Q15306 451 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 TRIP6Q15654 476 aaKnown RBP12.84□□□□□ -0.35
VPREB3-202ENST00000398465 ARMC12Q5T9G4 340 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 Q6ZSR6 202 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 USP45Q70EL2 814 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 KANSL1Q7Z3B3 1105 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 RCOR2Q8IZ40 523 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 LRRC57Q8N9N7 239 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 BMFQ96LC9 184 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 CAMK1GQ96NX5 476 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 LGMNQ99538 433 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 IL12RB2Q99665 862 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 TDRD1Q9BXT4 1180 aaKnown RBP12.84□□□□□ -0.35
VPREB3-202ENST00000398465 RBM22Q9NW64 420 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPREB3-202ENST00000398465 DNPEPQ9ULA0 475 aa12.84□□□□□ -0.35
VPREB3-202ENST00000398465 PHTF1Q9UMS5 762 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms