RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TRIM67Q6ZTA4 783 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SPATA31D4Q6ZUB0 917 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 UMODL1-AS1Q8N2C9 162 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 KDM1BQ8NB78 822 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ECSITQ9BQ95 431 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SP110Q9HB58 689 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PRDM5Q9NQX1 630 aaPredicted RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 IGSF5Q9NSI5 407 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MTF2Q9Y483 593 aaPredicted RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 DOCK4Q8N1I0 1966 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RGSL1A5PLK6 1076 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 WASH4PA8MWX3 477 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MMP2P08253 660 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ARSAP15289 507 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MSX2P35548 267 aaPredicted RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PPARGP37231 505 aaPredicted RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 POU4F1Q01851 419 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 DSC1Q08554 894 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MBTPS1Q14703 1052 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 DCP1BQ8IZD4 617 aaKnown RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 OR13J1Q8NGT2 312 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CNDP1Q96KN2 507 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PPP1R2P1Q96PQ5 205 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MRPL57Q9BQC6 102 aaKnown RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PRKD2Q9BZL6 878 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 OR51F1A6NGY5 319 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 UBTFL6P0CB48 400 aaPredicted RBP18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 NRG1Q02297 640 aaPredicted RBP18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 VARS2Q5ST30 1063 aaKnown RBP18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 LRRC49Q8IUZ0 686 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 COLGALT2Q8IYK4 626 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 OR6P1Q8NGX9 317 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 LINC01599Q8WXQ3 324 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RCN3Q96D15 328 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SPATA16Q9BXB7 569 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 GTSE1Q9NYZ3 720 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 NCKIPSDQ9NZQ3 722 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PDP2Q9P2J9 529 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SLC27A5Q9Y2P5 690 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 KCTD3Q9Y597 815 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RHOQP17081 205 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PAX3P23760 479 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 POLD2P49005 469 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ARSDP51689 593 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CYLC2Q14093 348 aaPredicted RBP18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 FBXL22Q6P050 247 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 DSELQ8IZU8 1212 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ARNT2Q9HBZ2 717 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RGS18Q9NS28 235 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CLIC5Q9NZA1 410 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 VTI1BQ9UEU0 232 aa18.46■□□□□ 0.55
CHRFAM7A-202ENST00000397827 A0A087X1B8 175 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CFLARO15519 480 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ZCCHC18P0CG32 403 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CCDC166P0CW27 439 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CKBP12277 381 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 RAG1P15918 1043 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 NDST2P52849 883 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 NKX3-2P78367 333 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ARHGAP18Q8N392 663 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 RNF148Q8N7C7 305 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SH3RF2Q8TEC5 729 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FBXO44Q9H4M3 255 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ATP13A1Q9HD20 1204 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TMEM248Q9NWD8 314 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 UXTQ9UBK9 157 aaPredicted RBP18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TADA2AO75478 443 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MSLNQ13421 630 aaPredicted RBP18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MSANTD2Q6P1R3 559 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SLC24A5Q71RS6 500 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PGBD5Q8N414 524 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 KYQ8NBH2 561 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ANKRD49Q8WVL7 239 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 GATA6Q92908 595 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PHF21BQ96EK2 531 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MYEOVQ96EZ4 313 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 HIC2Q96JB3 615 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ZNF385DQ9H6B1 395 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TNFRSF12AQ9NP84 129 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TLL2Q9Y6L7 1015 aa18.45■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FAM155AB1AL88 458 aaPredicted RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SLCO1B7G3V0H7 640 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SLC2A3P11169 496 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ATP5F1P24539 256 aaPredicted RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 DNAJB1P25685 340 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 NFE2Q16621 373 aaPredicted RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FAM83EQ2M2I3 478 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CTXN3Q4LDR2 81 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TECRLQ5HYJ1 363 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FAM26DQ5JW98 314 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 RP9Q8TA86 221 aaKnown RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 JADE3Q92613 823 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 HDAC10Q969S8 669 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 C8orf48Q96LL4 319 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CDRT15Q96T59 188 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PCDHB5Q9Y5E4 795 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 COPG1Q9Y678 874 aaKnown RBP18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 GMEB1Q9Y692 573 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SLC4A7Q9Y6M7 1214 aa18.44■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CA12O43570 354 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms