RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 USP34Q70CQ2 3546 aa25.56■■□□□ 1.68
TSPAN4-207ENST00000397411 HACD1B0YJ81 288 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 TRAFD1O14545 582 aaPredicted RBP25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 RIOK3O14730 519 aaKnown RBP25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 TM7SF2O76062 418 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 CPP00450 1065 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 PRKCGP05129 697 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 HNRNPA2B1P22626 353 aaKnown RBP25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 ZBTB17Q13105 803 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 TMEM52BQ4KMG9 183 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 TMEM259Q4ZIN3 620 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 ZSWIM9Q86XI8 627 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 ECHDC3Q96DC8 303 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 NSMCE3Q96MG7 304 aa25.55■■□□□ 1.68
TSPAN4-207ENST00000397411 C10orf142B7Z368 130 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 WNT9AO14904 365 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 VILLO15195 856 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 ZSCAN12O43309 604 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 HTRA2O43464 458 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 EPHB1P54762 984 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 SEMG2Q02383 582 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 TRAF2Q12933 501 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 XRCC4Q13426 336 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 PRKD1Q15139 912 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 SEL1L2Q5TEA6 688 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 LAYNQ6UX15 382 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 MINDY1Q8N5J2 469 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 MFSD2AQ8NA29 543 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 KLHDC7BQ96G42 594 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 C1QTNF7Q9BXJ2 289 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 FZD3Q9NPG1 666 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 PHTF1Q9UMS5 762 aa25.54■■□□□ 1.68
TSPAN4-207ENST00000397411 ZNF292O60281 2723 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 LZTS3O60299 673 aaPredicted RBP25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 MAGEC1O60732 1142 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 OPHN1O60890 802 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 LIMK1P53667 647 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 OTUD4Q01804 1114 aaKnown RBP25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 KIF19Q2TAC6 998 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 TEX44Q53QW1 395 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 DARS2Q6PI48 645 aaKnown RBP25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 TRIM58Q8NG06 486 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 ACTL9Q8TC94 416 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 C1QTNF2Q9BXJ5 285 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 GAREM1Q9H706 876 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 CA5BQ9Y2D0 317 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 SNX11Q9Y5W9 270 aa25.53■■□□□ 1.68
TSPAN4-207ENST00000397411 A8MX80 341 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 CDX4O14627 284 aaPredicted RBP25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 SPINT1O43278 529 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 PGLSO95336 258 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 CER1O95813 267 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 CD86P42081 329 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 EIF3EP60228 445 aaKnown RBP25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 NIPAL4Q0D2K0 466 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 NOMO1Q15155 1222 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 HLA-BQ31612 363 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 ALG1LQ6GMV1 187 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 CNTD1Q8N815 330 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 TTC13Q8NBP0 860 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 OR2I1PQ8NGU4 316 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 ARRDC2Q8TBH0 407 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 PDLIM2Q96JY6 352 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 HERPUD2Q9BSE4 406 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 KLHL8Q9P2G9 620 aaPredicted RBP25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 CACNA1EQ15878 2313 aa25.52■■□□□ 1.68
TSPAN4-207ENST00000397411 TLR4O00206 839 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 FPGTO14772 594 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 SLC30A4O14863 429 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 WNT1P04628 370 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 CYP2A6P11509 494 aaPredicted RBP25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 PTPN3P26045 913 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 ID4P47928 161 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 LIG3P49916 1009 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 MEI1Q5TIA1 1274 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 PID1Q7Z2X4 250 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 IQCHQ86VS3 1027 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 CDKL3Q8IVW4 592 aaPredicted RBP25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 HTR3CQ8WXA8 447 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 ASB12Q8WXK4 309 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 QKIQ96PU8 341 aaKnown RBP eCLIP25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 CHKBQ9Y259 395 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 HS3ST3A1Q9Y663 406 aa25.51■■□□□ 1.67
TSPAN4-207ENST00000397411 WDR87Q6ZQQ6 2873 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 A0A1W2PR77 199 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 KCNK3O14649 394 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 STK10O94804 968 aaKnown RBP25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 ELFN1P0C7U0 828 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 MMP12P39900 470 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 CLDN2P57739 230 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 BNC1Q01954 994 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 OVGP1Q12889 678 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 FGL2Q14314 439 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 FAM182AQ5T1J6 154 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 USP45Q70EL2 814 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 DPPA4Q7L190 304 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 RMDN1Q96DB5 314 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 LENG8Q96PV6 779 aaPredicted RBP25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 RBM15Q96T37 977 aaKnown RBP eCLIP25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 VAT1Q99536 393 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms