RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SLC10A7Q0GE19 358 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 FGL2Q14314 439 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 LRRC14Q15048 493 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 IFI16Q16666 785 aaKnown RBP14.05□□□□□ -0.16
SEC13-204ENST00000397099 ODF2Q5BJF6 829 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 ZFYVE27Q5T4F4 411 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 TXNRD3NBQ6F5E7 133 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 KANSL1Q7Z3B3 1105 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 EID2Q8N6I1 236 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 FAF2Q96CS3 445 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 MRFAP1L1Q96HT8 127 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 ZNF830Q96NB3 372 aaPredicted RBP14.05□□□□□ -0.16
SEC13-204ENST00000397099 TSGA13Q96PP4 275 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 CHP1Q99653 195 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 MYOCQ99972 504 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 MGME1Q9BQP7 344 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 PCDH12Q9NPG4 1184 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 SCUBE2Q9NQ36 999 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 ETNK2Q9NVF9 386 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 TOR4AQ9NXH8 423 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 NLGN3Q9NZ94 848 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 PTPRBP23467 1997 aa14.05□□□□□ -0.16
SEC13-204ENST00000397099 ARID1BQ8NFD5 2236 aaPredicted RBP14.05□□□□□ -0.16
SEC13-204ENST00000397099 MATN3O15232 486 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 SPINT1O43278 529 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 HTRA2O43464 458 aaPredicted RBP14.04□□□□□ -0.16
SEC13-204ENST00000397099 MMP20O60882 483 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 PIAS2O75928 621 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 PEX11BO96011 259 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 CKMT2P17540 419 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 CR2P20023 1033 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 DGKAP23743 735 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 CCNCP24863 283 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 HTR1BP28222 390 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 HNF1BP35680 557 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 GARSP41250 739 aaKnown RBP14.04□□□□□ -0.16
SEC13-204ENST00000397099 DUSP3P51452 185 aaPredicted RBP14.04□□□□□ -0.16
SEC13-204ENST00000397099 HADHBP55084 474 aaKnown RBP14.04□□□□□ -0.16
SEC13-204ENST00000397099 CLDN2P57739 230 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 GALNT2Q10471 571 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 BNIP3Q12983 259 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 MESDQ14696 234 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 SMAD1Q15797 465 aaKnown RBP14.04□□□□□ -0.16
SEC13-204ENST00000397099 ARHGAP36Q6ZRI8 547 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 TMPRSS7Q7RTY8 843 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 TMPRSS12Q86WS5 348 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 CAMK1DQ8IU85 385 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 SLC22A18ASQ8N1D0 253 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 SDR16C5Q8N3Y7 309 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 TEX26Q8N6G2 289 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 OR4C6Q8NH72 309 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 PACSIN1Q9BY11 444 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 POLR1EQ9GZS1 481 aaKnown RBP14.04□□□□□ -0.16
SEC13-204ENST00000397099 DNAJC28Q9NX36 388 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 DDX56Q9NY93 547 aaKnown RBP14.04□□□□□ -0.16
SEC13-204ENST00000397099 RALYQ9UKM9 306 aaKnown RBP14.04□□□□□ -0.16
SEC13-204ENST00000397099 DNPEPQ9ULA0 475 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 ITM2BQ9Y287 266 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 CA5BQ9Y2D0 317 aa14.04□□□□□ -0.16
SEC13-204ENST00000397099 ANKRD11Q6UB99 2663 aaPredicted RBP14.04□□□□□ -0.16
SEC13-204ENST00000397099 LRRK1Q38SD2 2015 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 TDRD6O60522 2096 aaKnown RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 TRAFD1O14545 582 aaPredicted RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 TPP1O14773 563 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 SCAMP1O15126 338 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 RAD51BO15315 384 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 LZTS3O60299 673 aaPredicted RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 RFPL3O75679 317 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 NEBLO76041 1014 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 IPO7O95373 1038 aaKnown RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 ELFN1P0C7U0 828 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 C6P13671 934 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 ACP1P24666 158 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 CYLC1P35663 651 aaPredicted RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 LIG3P49916 1009 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 E2F1Q01094 437 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 PDE1CQ14123 709 aaPredicted RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 FZD2Q14332 565 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 SPA17Q15506 151 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 MACC1Q6ZN28 852 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 DPPA4Q7L190 304 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 BZW1Q7L1Q6 419 aaKnown RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 CACTIN-AS1Q8N1I8 211 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 FAM181AQ8N9Y4 354 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 TP53I13Q8NBR0 393 aaPredicted RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 PCDH19Q8TAB3 1148 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 MAML1Q92585 1016 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 WRAP53Q9BUR4 548 aaKnown RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 MAK16Q9BXY0 300 aaKnown RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 BRD8Q9H0E9 1235 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 CCDC86Q9H6F5 360 aaKnown RBP14.03□□□□□ -0.16
SEC13-204ENST00000397099 SPTLC3Q9NUV7 552 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 GGT7Q9UJ14 662 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 PHTF1Q9UMS5 762 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 IGF2RP11717 2491 aa14.03□□□□□ -0.16
SEC13-204ENST00000397099 DSPP15924 2871 aaKnown RBP14.02□□□□□ -0.16
SEC13-204ENST00000397099 LCA5LO95447 670 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 HOXC4P09017 264 aaPredicted RBP14.02□□□□□ -0.17
SEC13-204ENST00000397099 CD48P09326 243 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 CYP2A6P11509 494 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms