RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 METTL18O95568 372 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 FADS2O95864 444 aaKnown RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 TBC1D21Q8IYX1 336 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 PIGKQ92643 395 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 RTKNQ9BST9 563 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 ABCC13Q9NSE7 274 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 SUCOQ9UBS9 1254 aaKnown RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 SCAF8Q9UPN6 1271 aaKnown RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 PRKG2Q13237 762 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 SUZ12Q15022 739 aaKnown RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 FBXL19Q6PCT2 694 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 AFTPHQ6ULP2 937 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF34Q8IZ26 560 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 PTGR2Q8N8N7 351 aaPredicted RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 SLC2A14Q8TDB8 520 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF224Q9NZL3 707 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 UGT2B17O75795 530 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 HGFP14210 728 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 GJA8P48165 433 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 PPP2R2BQ00005 443 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 ANXA8L1Q5VT79 327 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 PIWIL4Q7Z3Z4 852 aaKnown RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 ALLCQ8N6M5 410 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 CDADC1Q9BWV3 514 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 OR10H1Q9Y4A9 318 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 TSHRP16473 764 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 XKR6Q5GH73 641 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 TMPRSS11AQ6ZMR5 421 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 DEF8Q6ZN54 512 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 MED28Q9H204 178 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 ZDHHC6Q9H6R6 413 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 NEXMIFQ5QGS0 1516 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 SLC28A2O43868 658 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 CBX3Q13185 183 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 DNERQ8NFT8 737 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 LMAN2LQ9H0V9 348 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 CHST7Q9NS84 486 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 SAMD4AQ9UPU9 718 aaKnown RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 POMCP01189 267 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 MTHFRP42898 656 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 CRADDP78560 199 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 CCSAPQ6IQ19 270 aaPredicted RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 SLC34A3Q8N130 599 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 CDYL2Q8N8U2 506 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 PCSK9Q8NBP7 692 aaKnown RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 BAP1Q92560 729 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 TTLL2Q9BWV7 592 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 MBD5Q9P267 1494 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 UNC5AQ6ZN44 842 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 C11orf24Q96F05 449 aaPredicted RBP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 ASB8Q9H765 288 aa14.04□□□□□ -0.16
COL4A3-202ENST00000396578 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL4A3-202ENST00000396578 ABHD14A-ACY1A0A1B0GW23 586 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 OR14I1A6ND48 311 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 SIGLEC16A6NMB1 481 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 AVILO75366 819 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 PPP4CP60510 307 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 ALYREFQ86V81 257 aaKnown RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 FAM98AQ8NCA5 519 aaKnown RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 RBM4BQ9BQ04 359 aaKnown RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 RBM4Q9BWF3 364 aaKnown RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 FBXO6Q9NRD1 293 aaPredicted RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 MAP10Q9P2G4 905 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 AP5Z1O43299 807 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 LDOC1O95751 146 aaPredicted RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 DEFB106AQ8N104 65 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 MAGEL2Q9UJ55 1249 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 DDX3XO00571 662 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 NKRFO15226 690 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 TGFB3P10600 412 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 HSPA14Q0VDF9 509 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 MIIPQ5JXC2 388 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 SP140LQ9H930 580 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 TRPV5Q9NQA5 729 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 ABCA9Q8IUA7 1624 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 E5RJQ4 531 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 KPNA3O00505 521 aaPredicted RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 HDAC3O15379 428 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 PPIBP23284 216 aaKnown RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 ACTR3P61158 418 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 BTN3A2P78410 334 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 RCN3Q96D15 328 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 TNKS2Q9H2K2 1166 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 FRMPD1Q5SYB0 1578 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 BBIP1A8MTZ0 92 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 LINC00032P0C843 101 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 TFEBP19484 476 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 PSMA1P25786 263 aaKnown RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 CEBPGP53567 150 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 BACE1P56817 501 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 PPATQ06203 517 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 MTX3Q5HYI7 312 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 FAM171A1Q5VUB5 890 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF613Q6PF04 617 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF557Q8N988 423 aaPredicted RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 TRNT1Q96Q11 434 aaKnown RBP14.03□□□□□ -0.16
COL4A3-202ENST00000396578 EGFL7Q9UHF1 273 aa14.03□□□□□ -0.16
COL4A3-202ENST00000396578 FTH1P02794 183 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms