RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ACE2Q9BYF1 805 aaPredicted RBP5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RIBC2Q9H4K1 309 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 GALNT8Q9NY28 637 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 PCDHGB3Q9Y5G1 929 aa5.49□□□□□ -1.53
VPS13C-204ENST00000395898 RPTORQ8N122 1335 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 IRGMA1A4Y4 181 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 A8MX80 341 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 AP3D1O14617 1153 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 HDAC3O15379 428 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ITGA2BP08514 1039 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 FGRP09769 529 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 NR2F1P10589 423 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 GRM5P41594 1212 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 LGALS3BPQ08380 585 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 PPIDQ08752 370 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 NR1D2Q14995 579 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 PIGZQ86VD9 579 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 HDAC7Q8WUI4 952 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SHC3Q92529 594 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 MYDGFQ969H8 173 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 PANX1Q96RD7 426 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ZFYVE1Q9HBF4 777 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CYLDQ9NQC7 956 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 NECTIN3Q9NQS3 549 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 TBC1D14Q9P2M4 693 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SHPRHQ149N8 1683 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 DISP2A7MBM2 1401 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SNPHO15079 494 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 B4GALT4O60513 344 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CST1P01037 141 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 GPD2P43304 727 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 FAM92BQ6ZTR7 304 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CHSY3Q70JA7 882 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 C12orf56Q8IXR9 622 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CHPFQ8IZ52 775 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 MREGQ8N565 214 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 POU5F2Q8N7G0 328 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 RNASE11Q8TAA1 199 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 MYLPFQ96A32 169 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 TIFAQ96CG3 184 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 DNAJC19Q96DA6 116 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 REXO5Q96IC2 774 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 FAXDC2Q96IV6 333 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 EBNA1BP2Q99848 306 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 TBCDQ9BTW9 1192 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 PIGUQ9H490 435 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 KLHL31Q9H511 634 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 BRD9Q9H8M2 597 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SUCOQ9UBS9 1254 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 RAB23Q9ULC3 237 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 RPL26L1Q9UNX3 145 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 LINC00854A0A1B0GVQ3 168 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 NFKB1P19838 968 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 BEX3Q00994 111 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ZC3H12AQ5D1E8 599 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 TCEAL5Q5H9L2 206 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 DNAAF5Q86Y56 855 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 FIBCD1Q8N539 461 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 OR8D1Q8WZ84 308 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SEMA3CQ99985 751 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 OSBPL11Q9BXB4 747 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 IKZF3Q9UKT9 509 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 BBIP1A8MTZ0 92 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 TRAFD1O14545 582 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 MFN2O95140 757 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CAPN1P07384 714 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SPIRE1Q08AE8 756 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 GALNT18Q6P9A2 607 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 DNAJC14Q6Y2X3 702 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SPATA19Q7Z5L4 167 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 S100ZQ8WXG8 99 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ART4Q93070 314 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 IGFLR1Q9H665 355 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 VPS45Q9NRW7 570 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SEMA3GQ9NS98 782 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ITGB1BP2Q9UKP3 347 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ST3GAL5Q9UNP4 418 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SAMD4AQ9UPU9 718 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 BTBD3Q9Y2F9 522 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 hCG_1818297A0A087WSY0 165 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CHURC1-FNTBB4DL54 471 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SLC35G4P0C7Q5 338 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 KELP23276 732 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 GABRB2P47870 512 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 NOMO3P69849 1222 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 BNC1Q01954 994 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 PTGES3Q15185 160 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 RFX4Q33E94 735 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 MIIPQ5JXC2 388 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 GCNT7Q6ZNI0 430 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ILDR1Q86SU0 546 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SCAIQ8N9R8 606 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CLP1Q92989 425 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CDT1Q9H211 546 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ZFP14Q9HCL3 533 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 EXD2Q9NVH0 621 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 C15orf41Q9Y2V0 281 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 IRAK3Q9Y616 596 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 OR6C75A6NL08 312 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CACNB4O00305 520 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms