RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 FAM117BQ6P1L5 589 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 LGI2Q8N0V4 545 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CLYBLQ8N0X4 340 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF567Q8N184 647 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 OR2W6PQ8NHA6 318 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 DOCK7Q96N67 2140 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 TMEM237Q96Q45 408 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 BBS2Q9BXC9 721 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 C11orf49Q9H6J7 331 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ASB8Q9H765 288 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 TMEM248Q9NWD8 314 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 NCKAP1Q9Y2A7 1128 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SPTBN4Q9H254 2564 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 GREB1Q4ZG55 1949 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ENPP3O14638 875 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 PER2O15055 1255 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 FAM189A1O60320 539 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MYCP01106 439 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 LMO2P25791 158 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 MGAT1P26572 445 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 RAB33AQ14088 237 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 THEMIS2Q5TEJ8 643 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 DDIASQ8IXT1 998 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 COLGALT2Q8IYK4 626 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 TCEAL8Q8IYN2 117 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CELF5Q8N6W0 485 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ATAD1Q8NBU5 361 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 SRFBP1Q8NEF9 429 aaKnown RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF296Q8WUU4 475 aaPredicted RBP3.41□□□□□ -1.86
VPS13C-203ENST00000395896 ELMO2Q96JJ3 720 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 NECTIN4Q96NY8 510 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 BDH2Q9BUT1 245 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 POPDC3Q9HBV1 291 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 COPG2Q9UBF2 871 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 CTNNAL1Q9UBT7 734 aa3.41□□□□□ -1.86
VPS13C-203ENST00000395896 FAM95CA0A1B0GW59 222 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 PIPSLA2A3N6 862 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 LILRB3O75022 631 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 CNMDO75829 334 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 SLC4A1P02730 911 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 ACADSP16219 412 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 BRCC3P46736 316 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 PKDCCQ504Y2 493 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 C6orf10Q5SRN2 563 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 DAB2IPQ5VWQ8 1189 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 KLHL35Q6PF15 583 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 TSPEARQ8WU66 669 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 NCLNQ969V3 563 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 SH3KBP1Q96B97 665 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 TWNKQ96RR1 684 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 RMND5AQ9H871 391 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 WWOXQ9NZC7 414 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 OPTCQ9UBM4 332 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 MAP3K6O95382 1288 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 IFNA14P01570 189 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 C1orf53Q5VUE5 145 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 SERPINA13PQ6UXR4 307 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 RHEBL1Q8TAI7 183 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 GANCQ8TET4 914 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 CLP1Q92989 425 aaKnown RBP3.4□□□□□ -1.86
VPS13C-203ENST00000395896 RAB7BQ96AH8 199 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 SARS2Q9NP81 518 aaKnown RBP3.4□□□□□ -1.86
VPS13C-203ENST00000395896 ZDHHC7Q9NXF8 308 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 LZTS1Q9Y250 596 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 TBC1D3BA6NDS4 549 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 BBIP1A8MTZ0 92 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 HOXC8P31273 242 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 HMGCLP35914 325 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 HSD17B2P37059 387 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 CD86P42081 329 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 PFKPQ01813 784 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 CDC16Q13042 620 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 RAB30Q15771 203 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 DCAF12L1Q5VU92 463 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 TIFABQ6ZNK6 161 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 PRPF39Q86UA1 669 aaKnown RBP3.4□□□□□ -1.86
VPS13C-203ENST00000395896 OOSP2Q86WS3 158 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 OR52K1Q8NGK4 314 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 METTL6Q8TCB7 284 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 MLXIPLQ9NP71 852 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 TLR9Q9NR96 1032 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 NENFQ9UMX5 172 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 DOPEY2Q9Y3R5 2298 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 M0R3G1 203 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 ALDH1A2O94788 518 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 CXCL14O95715 111 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 PTGIRP43119 386 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 AQP5P55064 265 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 DSC1Q08554 894 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 FAM133BQ5BKY9 247 aaKnown RBP3.4□□□□□ -1.86
VPS13C-203ENST00000395896 CDKL4Q5MAI5 379 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 TMEM192Q8IY95 271 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 KREMEN2Q8NCW0 462 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 SMG8Q8ND04 991 aaKnown RBP3.4□□□□□ -1.86
VPS13C-203ENST00000395896 ERVW-1Q9UQF0 538 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 FNDC3AQ9Y2H6 1198 aaKnown RBP3.4□□□□□ -1.86
VPS13C-203ENST00000395896 MRPS17Q9Y2R5 130 aaKnown RBP3.4□□□□□ -1.86
VPS13C-203ENST00000395896 MPDZO75970 2070 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 PLCE1Q9P212 2302 aa3.4□□□□□ -1.86
VPS13C-203ENST00000395896 PTGESO14684 152 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms