RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 DENND6AQ8IWF6 608 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 CPSF7Q8N684 471 aaKnown RBP17.1■□□□□ 0.33
SREBF1-203ENST00000395751 BTN2A2Q8WVV5 523 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 SLC47A1Q96FL8 570 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 Q96MT0 163 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 MED28Q9H204 178 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 RASSF1Q9NS23 344 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 HOXC10Q9NYD6 342 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 MYOCOSA0A1B0GUC4 107 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 H3BMM5 538 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 SMIM22K7EJ46 135 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 RPS6KA4O75676 772 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 CYP7B1O75881 506 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 BCAS2O75934 225 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-203ENST00000395751 NTSR2O95665 410 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 CD4P01730 458 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 MLNP12872 115 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 IGFBP5P24593 272 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 ATP12AP54707 1039 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 PCID2Q5JVF3 399 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 ZNF549Q6P9A3 640 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 STARD8Q92502 1023 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 C2orf81A6NN90 581 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 TULP3O75386 442 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 PSIP1O75475 530 aaKnown RBP17.1■□□□□ 0.33
SREBF1-203ENST00000395751 MICAL2O94851 1124 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 C8BP07358 591 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 CDH1P12830 882 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 MMP8P22894 467 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 LIPEQ05469 1076 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 IL27RAQ6UWB1 636 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 CYP4V2Q6ZWL3 525 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-203ENST00000395751 AHSA2Q719I0 299 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 FEM1AQ9BSK4 669 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 OR2B2Q9GZK3 357 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 CRISPLD1Q9H336 500 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 RBM22Q9NW64 420 aaKnown RBP eCLIP17.1■□□□□ 0.332e-10■■■■□ 24.1
SREBF1-203ENST00000395751 OAZ3Q9UMX2 235 aa17.1■□□□□ 0.33
SREBF1-203ENST00000395751 LTFP02788 710 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 COL6A2P12110 1019 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 CDC42EP5Q6NZY7 148 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 CDC73Q6P1J9 531 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 RIOX2Q8IUF8 465 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 ZNF670Q9BS34 389 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 HERC2P3Q9BVR0 1158 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 ALG2Q9H553 416 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 ADGRE2Q9UHX3 823 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 SLC22A3O75751 556 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 TSPAN8P19075 237 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 TPSB2P20231 275 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 TPSAB1Q15661 275 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 BHLHB9Q6PI77 547 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 SLC44A2Q8IWA5 706 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-203ENST00000395751 B3GALNT2Q8NCR0 500 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 IRGQQ8WZA9 623 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 RHOJQ9H4E5 214 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 CYP3A7-CYP3A51PA0A087WV96 503 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 FAM92AA1XBS5 289 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 AURKAO14965 403 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 ORC5O43913 435 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 FAM189A1O60320 539 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 CYP3A7P24462 503 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 TSC22D1Q15714 1073 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 CTC1Q2NKJ3 1217 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 RASAL3Q86YV0 1011 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 HAPLN3Q96S86 360 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 TLE6Q9H808 572 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 SLC9A8Q9Y2E8 581 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 TK2O00142 265 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 HTRA2O43464 458 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-203ENST00000395751 SLC15A1P46059 708 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 ALDH6A1Q02252 535 aaKnown RBP17.09■□□□□ 0.33
SREBF1-203ENST00000395751 LCN1P1Q5VSP4 162 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 GAB3Q8WWW8 586 aa17.09■□□□□ 0.33
SREBF1-203ENST00000395751 H3BNH8 94 aa17.08■□□□□ 0.33
SREBF1-203ENST00000395751 RGS14O43566 566 aa17.08■□□□□ 0.33
SREBF1-203ENST00000395751 FOXD2O60548 495 aaPredicted RBP17.08■□□□□ 0.33
SREBF1-203ENST00000395751 PSMA1P25786 263 aaKnown RBP17.08■□□□□ 0.33
SREBF1-203ENST00000395751 SLC6A3Q01959 620 aa17.08■□□□□ 0.33
SREBF1-203ENST00000395751 PLEKHG6Q3KR16 790 aa17.08■□□□□ 0.33
SREBF1-203ENST00000395751 USP43Q70EL4 1123 aa17.08■□□□□ 0.33
SREBF1-203ENST00000395751 CCDC36Q8IYA8 594 aa17.08■□□□□ 0.33
SREBF1-203ENST00000395751 STAG3L4Q8TBR4 150 aa17.08■□□□□ 0.33
SREBF1-203ENST00000395751 SUCOQ9UBS9 1254 aaKnown RBP17.08■□□□□ 0.33
SREBF1-203ENST00000395751 CETPP11597 493 aa17.08■□□□□ 0.32
SREBF1-203ENST00000395751 CACNB2Q08289 660 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-203ENST00000395751 VPS26BQ4G0F5 336 aa17.08■□□□□ 0.32
SREBF1-203ENST00000395751 MPZL3Q6UWV2 235 aa17.08■□□□□ 0.32
SREBF1-203ENST00000395751 ZNF517Q6ZMY9 492 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-203ENST00000395751 MILR1Q7Z6M3 343 aa17.08■□□□□ 0.32
SREBF1-203ENST00000395751 PHC2Q8IXK0 858 aa17.08■□□□□ 0.32
SREBF1-203ENST00000395751 MPP5Q8N3R9 675 aa17.08■□□□□ 0.32
SREBF1-203ENST00000395751 AFG1LQ8WV93 481 aa17.08■□□□□ 0.32
SREBF1-203ENST00000395751 UTP4Q969X6 686 aaKnown RBP17.08■□□□□ 0.32
SREBF1-203ENST00000395751 SPATA33Q96N06 139 aa17.08■□□□□ 0.32
SREBF1-203ENST00000395751 HNRNPABQ99729 332 aaKnown RBP17.08■□□□□ 0.32
SREBF1-203ENST00000395751 YIPF2Q9BWQ6 316 aa17.08■□□□□ 0.32
SREBF1-203ENST00000395751 MLXQ9UH92 298 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms