RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 CAPN15O75808 1086 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 HGFP14210 728 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 OR1G1P47890 313 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 RABGGTBP53611 331 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 TAF1CQ15572 869 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 OTUD3Q5T2D3 398 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 OR2T34Q8NGX1 318 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 OR2T3Q8NH03 318 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 TRPC4APQ8TEL6 797 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 IRGQQ8WZA9 623 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 ASB9Q96DX5 294 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 SORT1Q99523 831 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 PIF1Q9H611 641 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 PLK2Q9NYY3 685 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.73□□□□□ -0.533e-8■■■□□ 18.1
UBE2D3-209ENST00000394804 LRFN2Q9ULH4 789 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 ASB3Q9Y575 518 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 A0A0J9YYE9 177 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 H3BNX3 289 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 MATN3O15232 486 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 SH3BP5O60239 455 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 AHSGP02765 367 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 PLIN5Q00G26 463 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 GALNT2Q10471 571 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 MGAT5BQ3V5L5 792 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 ZNF534Q76KX8 674 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 GPR142Q7Z601 462 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 STAG3L4Q8TBR4 150 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 STYXQ8WUJ0 223 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 FAM162AQ96A26 154 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 C19orf60Q96EN9 201 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 FCRL5Q96RD9 977 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 PKP2Q99959 881 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 HOPXQ9BPY8 73 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 THUMPD3Q9BV44 507 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 FBXO44Q9H4M3 255 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 COQ10BQ9H8M1 238 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 VPS45Q9NRW7 570 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 MPP6Q9NZW5 540 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 EGFL7Q9UHF1 273 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 SQORQ9Y6N5 450 aa11.73□□□□□ -0.53
UBE2D3-209ENST00000394804 SLC12A8A0AV02 714 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 BCAS2O75934 225 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 ESRRBO95718 433 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 SMPD1P17405 629 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 TKTP29401 623 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 THPOP40225 353 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 RGS4P49798 205 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 BEX3Q00994 111 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 CAPRIN1Q14444 709 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 POLD3Q15054 466 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 PRAMEF19Q5SWL8 479 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 OSTM1Q86WC4 334 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 TMEM126BQ8IUX1 230 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 CROCCP3Q8IVE0 287 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 SEPT5Q99719 369 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 POLR1EQ9GZS1 481 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 SFMBT1Q9UHJ3 866 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 DICER1Q9UPY3 1922 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 ZBTB42B2RXF5 422 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 F5H5T6 163 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 BUD23O43709 281 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 DNAJB1P25685 340 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 MAGEA3P43357 314 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 NEDD8Q15843 81 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 ARMC3Q5W041 872 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 PTRHD1Q6GMV3 140 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 FNDC5Q8NAU1 212 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 CDC26Q8NHZ8 85 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 ARNTL2Q8WYA1 636 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 LPPQ93052 612 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 RNF145Q96MT1 663 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 PAIP1Q9H074 479 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 PCDHAC1Q9H158 963 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 SEMA4BQ9NPR2 832 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 CATSPERZQ9NTU4 200 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 FAM105AQ9NUU6 356 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 SEPT3Q9UH03 358 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 SLC8A2Q9UPR5 921 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 TMEM233B4DJY2 109 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 NRP1O14786 923 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 DCLK1O15075 740 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 SYNCRIPO60506 623 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 HTR7P34969 479 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 ACAP2Q15057 778 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 SLC44A4Q53GD3 710 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 CLEC6AQ6EIG7 209 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 KIAA1841Q6NSI8 718 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 UGT3A1Q6NUS8 523 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 ZNF276Q8N554 614 aa11.72□□□□□ -0.53
UBE2D3-209ENST00000394804 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 PIRO00625 290 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 TREHO43280 583 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 OR1E1P30953 314 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 CCR10P46092 362 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 NR6A1Q15406 480 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 AARS2Q5JTZ9 985 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 IL23RQ5VWK5 629 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms