RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ADARB2Q9NS39 739 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-208ENST00000394803 DDX18Q9NVP1 670 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-208ENST00000394803 TBCCD1Q9NVR7 557 aa10.11□□□□□ -0.79
UBE2D3-208ENST00000394803 CCDC167Q9P0B6 97 aa10.11□□□□□ -0.79
UBE2D3-208ENST00000394803 CNOT6Q9ULM6 557 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-208ENST00000394803 FAF1Q9UNN5 650 aaPredicted RBP10.11□□□□□ -0.79
UBE2D3-208ENST00000394803 TRAF6Q9Y4K3 522 aa10.11□□□□□ -0.79
UBE2D3-208ENST00000394803 MBLAC1A4D2B0 266 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 A8MT66 165 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 DFFAO00273 331 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 HTRA2O43464 458 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 AKAP10O43572 662 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 BEST1O76090 585 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 CDK4P11802 303 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 ADRA1AP35348 466 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 CCR10P46092 362 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 LEPRP48357 1165 aaKnown RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 CSHL1Q14406 222 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 GJC2Q5T442 439 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 OLFML2BQ68BL8 750 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 RWDD4Q6NW29 188 aaKnown RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 ESRP1Q6NXG1 681 aaKnown RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 C8orf82Q6P1X6 216 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 CNSTQ6PJW8 725 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 DENND6AQ8IWF6 608 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 ZNF420Q8TAQ5 688 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 ADAM32Q8TC27 787 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 YTHDF1Q9BYJ9 559 aaKnown RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 CXCL16Q9H2A7 254 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 CHST12Q9NRB3 414 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 IGSF5Q9NSI5 407 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 IRAK4Q9NWZ3 460 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 UBP1Q9NZI7 540 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 KLK14Q9P0G3 267 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 SHROOM3Q8TF72 1996 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 JUNP05412 331 aaKnown RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 GPIP06744 558 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 USP17L7P0C7H9 530 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 HSD17B1P14061 328 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 FASP25445 335 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 HOXC13P31276 330 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 SLC5A2P31639 672 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 MSX2P35548 267 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 CRYBB1P53674 252 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 SNX17Q15036 470 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 ZBED5Q49AG3 693 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 AASDHQ4L235 1098 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 PAOXQ6QHF9 649 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 OTOP3Q7RTS5 596 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 EFL1Q7Z2Z2 1120 aaKnown RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 CLYBLQ8N0X4 340 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 RNF169Q8NCN4 708 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 ZSCAN18Q8TBC5 510 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 ADAMTS16Q8TE57 1224 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 GAB3Q8WWW8 586 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 FATE1Q969F0 183 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 FEM1CQ96JP0 617 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 SENP8Q96LD8 212 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 OMDQ99983 421 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 ARNT2Q9HBZ2 717 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 PREBQ9HCU5 417 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 CCM2LQ9NUG4 571 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 IPPQ9Y573 584 aa10.1□□□□□ -0.79
UBE2D3-208ENST00000394803 POLR2AP24928 1970 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 TRIM64CA6NLI5 447 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 H3BSA7 217 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 ANGPT2O15123 496 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 SLC7A4O43246 635 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 NOL3O60936 208 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 SMIM10L2AP0DMW4 78 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 SMIM10L2BP0DMW5 78 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 HNRNPLP14866 589 aaKnown RBP eCLIP10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 MYF6P23409 242 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 ATXN3P54252 364 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 SOX4Q06945 474 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 TMEM62Q0P6H9 643 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 SEPT6Q14141 434 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 TBC1D25Q3MII6 688 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 MTX3Q5HYI7 312 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 TMTC4Q5T4D3 741 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 TTC33Q6PID6 262 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 METTL23Q86XA0 190 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 MIER2Q8N344 545 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 MINDY1Q8N5J2 469 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 LEMD2Q8NC56 503 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 PNPT1Q8TCS8 783 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 USP33Q8TEY7 942 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 TFAP2CQ92754 450 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 C19orf60Q96EN9 201 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 PGLYRP2Q96PD5 576 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 SMOQ99835 787 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 KATNBL1Q9H079 304 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 SEMA6AQ9H2E6 1030 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 R3HDMLQ9H3Y0 253 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 POPDC3Q9HBV1 291 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 CSNK1G1Q9HCP0 422 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 SLC45A1Q9Y2W3 748 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 RNF11Q9Y3C5 154 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 DHRS12A0PJE2 317 aa10.09□□□□□ -0.79
UBE2D3-208ENST00000394803 C7orf72A4D263 438 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms