RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 KRT10P13645 584 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 NR2C2P49116 596 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 GSDMDP57764 484 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 YPEL5P62699 121 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 PTK2BQ14289 1009 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 PDK1Q15118 436 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 LRRC73Q5JTD7 316 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 RAD9BQ6WBX8 426 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 DPPA4Q7L190 304 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 ZSWIM9Q86XI8 627 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 RFX6Q8HWS3 928 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 KATNAL2Q8IYT4 538 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 NDUFAF2Q8N183 169 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 PGBD5Q8N414 524 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 PLD5Q8N7P1 536 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 OR13H1Q8NG92 308 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 TPCN2Q8NHX9 752 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 RHBDD1Q8TEB9 315 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 RBM41Q96IZ5 413 aaKnown RBP12.76□□□□□ -0.37
GGPS1-203ENST00000391855 NT5MQ9NPB1 228 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 APOBEC2Q9Y235 224 aaKnown RBP12.76□□□□□ -0.37
GGPS1-203ENST00000391855 CA5BQ9Y2D0 317 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 ANKRD36A6QL64 1941 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 COL5A1P20908 1838 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-203ENST00000391855 H3BM21 787 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 LZTS3O60299 673 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-203ENST00000391855 ELFN1P0C7U0 828 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 CYP2A6P11509 494 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-203ENST00000391855 C6P13671 934 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 TNNT1P13805 278 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 CCNB1P14635 433 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 TGM2P21980 687 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 CLDN2P57739 230 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 PFN3P60673 137 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 IFI35P80217 286 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-203ENST00000391855 SHC2P98077 582 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 SHBQ15464 509 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 TAZQ16635 292 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 ARMC12Q5T9G4 340 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 MFSD7Q6UXD7 560 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 Q6ZSR6 202 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 DAAM2Q86T65 1068 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 PARGQ86W56 976 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 CCNYQ8ND76 341 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 SLC39A7Q92504 469 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 BMFQ96LC9 184 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 OLFM3Q96PB7 478 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 SEMA3CQ99985 751 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 WRAP53Q9BUR4 548 aaKnown RBP12.75□□□□□ -0.37
GGPS1-203ENST00000391855 NOD2Q9HC29 1040 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 RBM22Q9NW64 420 aaKnown RBP eCLIP12.75□□□□□ -0.37
GGPS1-203ENST00000391855 ANGPTL2Q9UKU9 493 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 PHTF1Q9UMS5 762 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 HEY1Q9Y5J3 304 aa12.75□□□□□ -0.37
GGPS1-203ENST00000391855 CNOT1A5YKK6 2376 aaKnown RBP12.75□□□□□ -0.37
GGPS1-203ENST00000391855 SHROOM3Q8TF72 1996 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 SPAARA0A1B0GVQ0 90 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 RAD51BO15315 384 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 TNFSF14O43557 240 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 ZRANB2O95218 330 aaKnown RBP eCLIP12.74□□□□□ -0.37
GGPS1-203ENST00000391855 PGLSO95336 258 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 MAP3K6O95382 1288 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 IGFALSP35858 605 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 CDKN2BP42772 138 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 LIG3P49916 1009 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 THOP1P52888 689 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 MAXP61244 160 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 HNRNPKP61978 463 aaKnown RBP eCLIP12.74□□□□□ -0.37
GGPS1-203ENST00000391855 FAM193AP78312 1265 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 IL9RQ01113 521 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 ITKQ08881 620 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 TRAF2Q12933 501 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 RALGDSQ12967 914 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 LRRC14Q15048 493 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 PPP2R5EQ16537 467 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 TFDP3Q5H9I0 405 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 PRAMEF14Q5SWL7 426 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 SPOCD1Q6ZMY3 1216 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 USP45Q70EL2 814 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 TMEM139Q8IV31 216 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 RCOR2Q8IZ40 523 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 SLC22A18ASQ8N1D0 253 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 TP53I13Q8NBR0 393 aaPredicted RBP12.74□□□□□ -0.37
GGPS1-203ENST00000391855 SPC24Q8NBT2 197 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 ATL2Q8NHH9 583 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 EXD1Q8NHP7 514 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 CENPTQ96BT3 561 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 CAMK1GQ96NX5 476 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 IL12RB2Q99665 862 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 FTSJ1Q9UET6 329 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 DNPEPQ9ULA0 475 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 REXO2Q9Y3B8 237 aaKnown RBP12.74□□□□□ -0.37
GGPS1-203ENST00000391855 HYOU1Q9Y4L1 999 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 PCDHGC4Q9Y5F7 938 aa12.74□□□□□ -0.37
GGPS1-203ENST00000391855 PCNX2A6NKB5 2137 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 DOCK9Q9BZ29 2069 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 SPTY2D1-AS1A0A0U1RR47 76 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 CCDC66A2RUB6 948 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 POM121BA6NF01 834 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms