RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 CLDN16Q9Y5I7 305 aa1.52□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ADGRF5Q8IZF2 1346 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 LGALS16A8MUM7 142 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 WNT9BO14905 357 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 HNRNPRO43390 633 aaKnown RBP1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 RFPL2O75678 378 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CSF1P09603 554 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ITGA2P17301 1181 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ITGAXP20702 1163 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SERPINA4P29622 427 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 LUMP51884 338 aaPredicted RBP1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ARSFP54793 590 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 GNB1P62873 340 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 PITX1P78337 314 aaPredicted RBP1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ARHGAP8P85298 464 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 PTK2BQ14289 1009 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 RPS6KA2Q15349 733 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 LONRF1Q17RB8 773 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SOWAHAQ2M3V2 549 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ATP13A5Q4VNC0 1218 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 IRAK1BP1Q5VVH5 260 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SPINK14Q6IE38 97 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 DGAT2L7PQ6IED9 249 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 GGT6Q6P531 493 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 METTL7BQ6UX53 244 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 B3GNT6Q6ZMB0 384 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ZNF852Q6ZMS4 543 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 FOXRED2Q8IWF2 684 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SFTPA2Q8IWL1 248 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 OR10V1Q8NGI7 309 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 C3orf49Q96BT1 292 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CCDC138Q96M89 665 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 C17orf77Q96MU5 243 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CTDSP1Q9GZU7 261 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 PABPC3Q9H361 631 aaKnown RBP1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 OBP2BQ9NPH6 170 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CYSLTR2Q9NS75 346 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CHPF2Q9P2E5 772 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 NDRG3Q9UGV2 375 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 TINAGQ9UJW2 476 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CDC14AQ9UNH5 594 aa1.51□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ATXN2Q99700 1313 aaKnown RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 KIAA1210Q9ULL0 1709 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 NR5A2O00482 541 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 PLRG1O43660 514 aaKnown RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ZNF821O75541 412 aaPredicted RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ACTL6BO94805 426 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ADAP00813 363 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SERPINC1P01008 464 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 INHBAP08476 426 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 TFPIP10646 304 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SRD5A1P18405 259 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SP100P23497 879 aaPredicted RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 HNRNPH1P31943 449 aaKnown RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SLC8A3P57103 927 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 AP2B1P63010 937 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ZNF239Q16600 458 aaKnown RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 LIN54Q6MZP7 749 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SYT13Q7L8C5 426 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CHERPQ8IWX8 916 aaKnown RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SYTL1Q8IYJ3 562 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 FAM186BQ8IYM0 893 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ZNF34Q8IZ26 560 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 FAM177A1Q8N128 213 aaPredicted RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ZMIZ2Q8NF64 920 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 TRIM58Q8NG06 486 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 DUSP19Q8WTR2 217 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ABTB1Q969K4 478 aaPredicted RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 EID2BQ96D98 161 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ZNF414Q96IQ9 312 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ZNF583Q96ND8 569 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 FSD1Q9BTV5 496 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 KATNAL1Q9BW62 490 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 WDR13Q9H1Z4 485 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 PLEKHA5Q9HAU0 1116 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ZDHHC18Q9NUE0 388 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 SPATS2LQ9NUQ6 558 aaKnown RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 TMEM30AQ9NV96 361 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CDC23Q9UJX2 597 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 BAG5Q9UL15 447 aa1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 C19orf53Q9UNZ5 99 aaPredicted RBP1.5□□□□□ -2.17
RNU6-1228P-201ENST00000391014 A0A087X002 238 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 GOLGA6L3A6NEY3 463 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ATP2C2O75185 946 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CAVIN2O95810 425 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 TRIM27P14373 513 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 PAX1P15863 534 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 STX2P32856 288 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 RYKP34925 604 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 DCTP40126 519 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 PNPLA4P41247 253 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 HOXA1P49639 335 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 CLK1P49759 484 aaKnown RBP1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 HDAC4P56524 1084 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 IRX1P78414 480 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 GALNT1Q10472 559 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 ESCO2Q56NI9 601 aa1.49□□□□□ -2.17
RNU6-1228P-201ENST00000391014 RUNDC3AQ59EK9 446 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms