RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 TYROBPO43914 113 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 TBX10O75333 385 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 RFPL1O75677 317 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 CES1P23141 567 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 GMPRP36959 345 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 SF3A3Q12874 501 aaKnown RBP eCLIP12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 FRG1Q14331 258 aaKnown RBP12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 PDPK2PQ6A1A2 396 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 SH2D5Q6ZV89 423 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 TAX1BP1Q86VP1 789 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 OR13C4Q8NGS5 318 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 RANBP9Q96S59 729 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 MYADMQ96S97 322 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 CPNE1Q99829 537 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 PAIP2Q9BPZ3 127 aaKnown RBP12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 SUDS3Q9H7L9 328 aaPredicted RBP12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 GDE1Q9NZC3 331 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 SENP1Q9P0U3 644 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 PCDHB9Q9Y5E1 797 aa12.27□□□□□ -0.45
SPTBN1-203ENST00000389980 OR51F1A6NGY5 319 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 TOP3BO95985 862 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ITGA2BP08514 1039 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 GBP2P32456 591 aaPredicted RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 GP5P40197 560 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ABL2P42684 1182 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 SERPINB9P50453 376 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 WDR4P57081 412 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 MPP1Q00013 466 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ECT2LQ008S8 904 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 GRM2Q14416 872 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC14A2Q15849 920 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 LGSNQ5TDP6 509 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 MBLAC2Q68D91 279 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 BANPQ8N9N5 519 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ACVR1CQ8NER5 493 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 MDGA1Q8NFP4 955 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 HDAC10Q969S8 669 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 DNAJC1Q96KC8 554 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 PLA2G2FQ9BZM2 168 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 CXorf56Q9H5V9 222 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 CLDND1Q9NY35 253 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC17A7Q9P2U7 560 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC25A13Q9UJS0 675 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ATXN2Q99700 1313 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ANKRD66B4E2M5 251 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 PRPF4O43172 522 aaKnown RBP eCLIP12.26□□□□□ -0.451e-16■□□□□ 8.1
SPTBN1-203ENST00000389980 ALDOAP04075 364 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ALADP13716 330 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 CTPS1P17812 591 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 GABRB3P28472 473 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC6A11P48066 632 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 PGGT1BP53609 377 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 NAB1Q13506 487 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 DLG2Q15700 870 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 QPCTQ16769 361 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ATAT1Q5SQI0 421 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 NAIF1Q69YI7 327 aaPredicted RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 KIAA0930Q6ICG6 404 aaPredicted RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 C22orf39Q6P5X5 142 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ZNF449Q6P9G9 518 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 VITQ6UXI7 678 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 PTAR1Q7Z6K3 402 aaPredicted RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 BRSK1Q8TDC3 778 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 TCP10LQ8TDR4 215 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 TBATAQ96M53 351 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 RBBP8Q99708 897 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 KXD1Q9BQD3 176 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC13A1Q9BZW2 595 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 S1PR5Q9H228 398 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 PCMTD2Q9NV79 361 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 NKIRAS1Q9NYS0 192 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 CDH7Q9ULB5 785 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 GRID1Q9ULK0 1009 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 HS3ST2Q9Y278 367 aa12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 MTO1Q9Y2Z2 717 aaKnown RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 ARIH1Q9Y4X5 557 aaPredicted RBP12.26□□□□□ -0.45
SPTBN1-203ENST00000389980 GMNCA6NCL1 334 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 TPP1O14773 563 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 TULP3O75386 442 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 IGSF6O95976 241 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 ADH1CP00326 375 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 CISD3P0C7P0 127 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 PAMP19021 973 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC1A2P43004 574 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 DGKGP49619 791 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 AP1S1P61966 158 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 PDE1BQ01064 536 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC18A2Q05940 514 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 THOC5Q13769 683 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 GRTP1Q5TC63 336 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 ZNF470Q6ECI4 717 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 FSTL4Q6MZW2 842 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 CDHR3Q6ZTQ4 885 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 Q6ZVU0 165 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 LDB1Q86U70 411 aaPredicted RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 SPATS2Q86XZ4 545 aaKnown RBP12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 DCLK2Q8N568 766 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 OR2AP1Q8NGE2 309 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 OR6P1Q8NGX9 317 aa12.25□□□□□ -0.45
SPTBN1-203ENST00000389980 DENND1AQ8TEH3 1009 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms