RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TFEBP19484 476 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 GSTA3Q16772 222 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 RORBQ92753 470 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 KLHL5Q96PQ7 755 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 KCTD15Q96SI1 283 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-201ENST00000378156 ACBD6Q9BR61 282 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 C9orf16Q9BUW7 83 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 GLOD4Q9HC38 313 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 XPR1Q9UBH6 696 aa15.11■□□□□ 0.01
NPHP4-201ENST00000378156 NUP188Q5SRE5 1749 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 CA12O43570 354 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 TSPAN8P19075 237 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 LPOP22079 712 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 IL12RB1P42701 662 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 AFTPHQ6ULP2 937 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 GLIS1Q8NBF1 620 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 FAXDC2Q96IV6 333 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 CLPTM1LQ96KA5 538 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 GMLQ99445 158 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 KCTD14Q9BQ13 255 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 C1orf50Q9BV19 199 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 SDCBP2Q9H190 292 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 HPS4Q9NQG7 708 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 KRT84Q9NSB2 600 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 TDRKHQ9Y2W6 561 aaKnown RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 TPRKBQ9Y3C4 175 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 HBS1LQ9Y450 684 aaKnown RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 BCLAF3A2AJT9 711 aaKnown RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 C2CD4BA6NLJ0 364 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 FGF1P05230 155 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 PSMB9P28065 219 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 PTPN9P43378 593 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 RFX3P48380 749 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 SLC5A3P53794 718 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 ANGPT1Q15389 498 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 PYROXD2Q8N2H3 581 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 PPP1R16AQ96I34 528 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 NSMCE2Q96MF7 247 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 SEMA4BQ9NPR2 832 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 ACSS2Q9NR19 701 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 MGRN1O60291 552 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 RPN2P04844 631 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 FGFR3P22607 806 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 ASPAP45381 313 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 NRF1Q16656 503 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 ANKS1BQ7Z6G8 1248 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 TMEM192Q8IY95 271 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 SLAIN1Q8ND83 568 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 RBM15BQ8NDT2 890 aaKnown RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 DQX1Q8TE96 717 aaKnown RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 HDAC10Q969S8 669 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 DENND2DQ9H6A0 471 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 VPS45Q9NRW7 570 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 NCKAP1Q9Y2A7 1128 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 PCDHB9Q9Y5E1 797 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 ARL5CA6NH57 179 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 ANXA5P08758 320 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 CES1P23141 567 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 GSTT1P30711 240 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 CRHR1P34998 444 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 RAB10P61026 200 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 PPM1JQ5JR12 505 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 PPP1R15BQ5SWA1 713 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 OTUD3Q5T2D3 398 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 DOK6Q6PKX4 331 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.1■□□□□ 0.015e-8■■■■■ 204.6
NPHP4-201ENST00000378156 DHRSXQ8N5I4 330 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 PTGR2Q8N8N7 351 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 SLCO2A1Q92959 643 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 DCUN1D5Q9BTE7 237 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 BPIFA1Q9NP55 256 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 CYLDQ9NQC7 956 aa15.1■□□□□ 0.01
NPHP4-201ENST00000378156 C6orf203Q9P0P8 240 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-201ENST00000378156 IL1R2P27930 398 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 PIK3R1P27986 724 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 IL5RAQ01344 420 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 SP2Q02086 613 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 DHDDSQ86SQ9 333 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 ZNF317Q96PQ6 595 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-201ENST00000378156 GMIPQ9P107 970 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 HMGXB4Q9UGU5 601 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 CORO1CQ9ULV4 474 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-201ENST00000378156 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-201ENST00000378156 CENPXA8MT69 81 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 MDM4O15151 490 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 C2P06681 752 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 HNRNPLP14866 589 aaKnown RBP eCLIP15.09■□□□□ 0.01
NPHP4-201ENST00000378156 TPSB2P20231 275 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 FRG1Q14331 258 aaKnown RBP15.09■□□□□ 0.01
NPHP4-201ENST00000378156 TPSAB1Q15661 275 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 IL27RAQ6UWB1 636 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 MTSS1LQ765P7 747 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 PIWIL4Q7Z3Z4 852 aaKnown RBP15.09■□□□□ 0.01
NPHP4-201ENST00000378156 LMO3Q8TAP4 145 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 IRGQQ8WZA9 623 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 RAP2CQ9Y3L5 183 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 LINC00854A0A1B0GVQ3 168 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 RGSL1A5PLK6 1076 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 H0YC42 278 aa15.09■□□□□ 0.01
NPHP4-201ENST00000378156 CLDN11O75508 207 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms