RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 FSTL4Q6MZW2 842 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 CLEC14AQ86T13 490 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 SPATS2Q86XZ4 545 aaKnown RBP11.18□□□□□ -0.62
PDPN-202ENST00000376057 OR2AP1Q8NGE2 309 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 BPIFB1Q8TDL5 484 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 TCP10LQ8TDR4 215 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 ATP2A3Q93084 1043 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 GRAMD1AQ96CP6 724 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 CCT8L2Q96SF2 557 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 TCF12Q99081 682 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 AGAP2Q99490 1192 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 LINC00597Q9H2U6 94 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 DUS2Q9NX74 493 aaKnown RBP11.18□□□□□ -0.62
PDPN-202ENST00000376057 GRID1Q9ULK0 1009 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 ANKRD36A6QL64 1941 aa11.18□□□□□ -0.62
PDPN-202ENST00000376057 MKI67P46013 3256 aaKnown RBP11.18□□□□□ -0.62
PDPN-202ENST00000376057 C2orf81A6NN90 581 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 GLRA3O75311 464 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 VAPBO95292 243 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 NFATC1O95644 943 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 FCARP24071 287 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 ECT2LQ008S8 904 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 FCHO2Q0JRZ9 810 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 QPCTQ16769 361 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 MROH9Q5TGP6 573 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 LINGO4Q6UY18 593 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 TRIM42Q8IWZ5 723 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 ETFBKMTQ8IXQ9 262 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 PIH1D2Q8WWB5 315 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 MRRFQ96E11 262 aaKnown RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 FAM83CQ9BQN1 747 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 ATP13A3Q9H7F0 1226 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 THG1LQ9NWX6 298 aaKnown RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 SLC2A6Q9UGQ3 507 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 CDH7Q9ULB5 785 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 MUC22E2RYF6 1773 aaPredicted RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 TTC24A2A3L6 582 aaPredicted RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 CCDC85CA6NKD9 419 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 NEDD8-MDP1E9PL57 170 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 SPAG7O75391 227 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 GJB3O75712 270 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 PIAS1O75925 651 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 MT-CO1P00395 513 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 AHSGP02765 367 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 CYP17A1P05093 508 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 CD9P21926 228 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 SLC26A3P40879 764 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 POU4F1Q01851 419 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 ZKSCAN8Q15776 578 aaPredicted RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 TYSND1Q2T9J0 566 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 MYLK3Q32MK0 819 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 ARMC12Q5T9G4 340 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 TMC5Q6UXY8 1006 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 PIGWQ7Z7B1 504 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 CILP2Q8IUL8 1156 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 BCAS4Q8TDM0 211 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 FGF13Q92913 245 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 PTPRN2Q92932 1015 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 LRIG1Q96JA1 1093 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 VPS39Q96JC1 886 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 LRRC3BQ96PB8 259 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 NSRP1Q9H0G5 558 aaKnown RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 S1PR5Q9H228 398 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 INTS10Q9NVR2 710 aaKnown RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 GGT7Q9UJ14 662 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 CHKBQ9Y259 395 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 FCF1Q9Y324 198 aaKnown RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 TSPAN11A1L157 253 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 POP4O95707 220 aaKnown RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 ADH5P11766 374 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 LPOP22079 712 aaPredicted RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 GABRB3P28472 473 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 CRABP2P29373 138 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 CLCN5P51795 746 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 CTC1Q2NKJ3 1217 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 CCDC153Q494R4 210 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 DGKKQ5KSL6 1271 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 HHATQ5VTY9 493 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 C22orf39Q6P5X5 142 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 RAVER1Q8IY67 606 aaKnown RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 TTC30BQ8N4P2 665 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 DCLK2Q8N568 766 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 C12orf76Q8N812 135 aaPredicted RBP11.17□□□□□ -0.62
PDPN-202ENST00000376057 RSPRY1Q96DX4 576 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 POPDC3Q9HBV1 291 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 FBXO5Q9UKT4 447 aa11.17□□□□□ -0.62
PDPN-202ENST00000376057 DOCK6Q96HP0 2047 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 COL4A3Q01955 1670 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 TPP1O14773 563 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 SMAD6O43541 496 aaKnown RBP11.16□□□□□ -0.62
PDPN-202ENST00000376057 TAC1P20366 129 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 EIF2DP41214 584 aaKnown RBP11.16□□□□□ -0.62
PDPN-202ENST00000376057 SLC1A2P43004 574 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 BCL2L1Q07817 233 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 PDE1CQ14123 709 aaPredicted RBP11.16□□□□□ -0.62
PDPN-202ENST00000376057 CARD16Q5EG05 197 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 RARS2Q5T160 578 aaKnown RBP11.16□□□□□ -0.62
PDPN-202ENST00000376057 TTC19Q6DKK2 380 aaPredicted RBP11.16□□□□□ -0.62
PDPN-202ENST00000376057 LVRNQ6Q4G3 990 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms