RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ZNF460Q14592 562 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 CCDC6Q16204 474 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 RABGAP1LQ5R372 815 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 ACBD5Q5T8D3 534 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-202ENST00000374487 C6orf163Q5TEZ5 329 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 FAM43BQ6ZT52 329 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-202ENST00000374487 CIR1Q86X95 450 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-202ENST00000374487 CEP97Q8IW35 865 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 SCUBE1Q8IWY4 988 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 FSTL5Q8N475 847 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-202ENST00000374487 C2CD4AQ8NCU7 369 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-202ENST00000374487 GIPC2Q8TF65 315 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 SPATA17Q96L03 361 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 TCF25Q9BQ70 676 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 ZNF195O14628 629 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 TLR5O60602 858 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 GNAZP19086 355 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 NRIP1P48552 1158 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 CSRP3P50461 194 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 KPNA1P52294 538 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-202ENST00000374487 NAGLUP54802 743 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 PARP15Q460N3 678 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 FSCBQ5H9T9 825 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 RTP2Q5QGT7 225 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 SNX30Q5VWJ9 437 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 LRRC8EQ6NSJ5 796 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 RSPO2Q6UXX9 243 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-202ENST00000374487 KIAA0408Q6ZU52 694 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 ANKS3Q6ZW76 656 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 CENPLQ8N0S6 344 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-202ENST00000374487 SPATA6LQ8N4H0 392 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 NXNL1Q96CM4 212 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 CMTM5Q96DZ9 223 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 NACA2Q9H009 215 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 DRC3Q9H069 523 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 C1orf21Q9H246 121 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 CRISPLD1Q9H336 500 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 CCSER2Q9H7U1 834 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 MAN1C1Q9NR34 630 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 TLR9Q9NR96 1032 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 MYO16Q9Y6X6 1858 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 A0A087X1B8 175 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 TTC24A2A3L6 582 aaPredicted RBP12.17□□□□□ -0.46
HMGCL-202ENST00000374487 DRGXA6NNA5 263 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 TM7SF2O76062 418 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 CCNG1P51959 295 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 KPNA2P52292 529 aaKnown RBP12.17□□□□□ -0.46
HMGCL-202ENST00000374487 RAP1GDS1P52306 607 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 COPAP53621 1224 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 POU4F1Q01851 419 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 RING1Q06587 406 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 IL10RBQ08334 325 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 ASPHQ12797 758 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 RCN1Q15293 331 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 TSNAXIP1Q2TAA8 658 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 ACSBG2Q5FVE4 666 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 TSTD2Q5T7W7 516 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 ARMC3Q5W041 872 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 EPGNQ6UW88 154 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 TMC7Q7Z402 723 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 MFSD6LQ8IWD5 586 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 TMEM151AQ8N4L1 468 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 VN1R2Q8NFZ6 395 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 OR6P1Q8NGX9 317 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 STYXQ8WUJ0 223 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 WDR60Q8WVS4 1066 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 TMEM169Q96HH4 297 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 TTPALQ9BTX7 342 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 ACSS2Q9NR19 701 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 COMMD8Q9NX08 183 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 XPR1Q9UBH6 696 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 STOML1Q9UBI4 398 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 UXTQ9UBK9 157 aaPredicted RBP12.17□□□□□ -0.46
HMGCL-202ENST00000374487 RAP2CQ9Y3L5 183 aa12.17□□□□□ -0.46
HMGCL-202ENST00000374487 E9PBE3 544 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 H3BQ06 376 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 DCXO43602 365 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 KLHL41O60662 606 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 IGLV3-27P01718 113 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 CHRNGP07510 517 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 NUMBP49757 651 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 RPL14P50914 215 aaKnown RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 SESN3P58005 492 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 TAS2R39P59534 338 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 MTA1Q13330 715 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 SERINC3Q13530 473 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 LBRQ14739 615 aaKnown RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 ARL13AQ5H913 290 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 CNSTQ6PJW8 725 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 ULK2Q8IYT8 1036 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 TEX26Q8N6G2 289 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 POU5F2Q8N7G0 328 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 MOCOSQ96EN8 888 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 IFT43Q96FT9 208 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 RANBP9Q96S59 729 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 UNKQ9C0B0 810 aaKnown RBP12.16□□□□□ -0.46
HMGCL-202ENST00000374487 ATP13A1Q9HD20 1204 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 MEI4A8MW99 385 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 F5H5T6 163 aa12.16□□□□□ -0.46
HMGCL-202ENST00000374487 PAPSS2O95340 614 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms