RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 TEKT5Q96M29 485 aa18.49■□□□□ 0.55
PBX3-205ENST00000373492 OSBPL9Q96SU4 736 aa18.49■□□□□ 0.55
PBX3-205ENST00000373492 NAP1L3Q99457 506 aaPredicted RBP18.49■□□□□ 0.55
PBX3-205ENST00000373492 NAPGQ99747 312 aaPredicted RBP18.49■□□□□ 0.55
PBX3-205ENST00000373492 TMEM9BQ9NQ34 198 aa18.49■□□□□ 0.55
PBX3-205ENST00000373492 SNX12Q9UMY4 172 aa18.49■□□□□ 0.55
PBX3-205ENST00000373492 R3HDM2Q9Y2K5 976 aaKnown RBP18.49■□□□□ 0.55
PBX3-205ENST00000373492 ZKSCAN5Q9Y2L8 839 aa18.49■□□□□ 0.55
PBX3-205ENST00000373492 TMEM131Q92545 1883 aa18.49■□□□□ 0.55
PBX3-205ENST00000373492 DCHS1Q96JQ0 3298 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 A0A1W2PPC4 97 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 CES2O00748 559 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 TRAFD1O14545 582 aaPredicted RBP18.48■□□□□ 0.55
PBX3-205ENST00000373492 ARHGAP33O14559 1287 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 CDX4O14627 284 aaPredicted RBP18.48■□□□□ 0.55
PBX3-205ENST00000373492 HTRA2O43464 458 aaPredicted RBP18.48■□□□□ 0.55
PBX3-205ENST00000373492 AP1G1O43747 822 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 PCDH8O95206 1070 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 TCP1P17987 556 aaKnown RBP18.48■□□□□ 0.55
PBX3-205ENST00000373492 WASHC5Q12768 1159 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 UGP2Q16851 508 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 ARMC12Q5T9G4 340 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 ITPRIPL1Q6GPH6 555 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 ERAP2Q6P179 960 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 NEK5Q6P3R8 708 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 ZNF567Q8N184 647 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 SLC35B2Q8TB61 432 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 ARRDC2Q8TBH0 407 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 ECHDC3Q96DC8 303 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 ZDHHC5Q9C0B5 715 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 SLC25A51Q9H1U9 297 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 C10orf88Q9H8K7 445 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 GLOD4Q9HC38 313 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 HOMER3Q9NSC5 361 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 DNPEPQ9ULA0 475 aa18.48■□□□□ 0.55
PBX3-205ENST00000373492 CTAGE9A4FU28 777 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 C4orf47A7E2U8 309 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 UPK3BL1B0FP48 263 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 UPK3BL2E5RIL1 263 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 TSPAN6O43657 245 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 LIASO43766 372 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 CPP00450 1065 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 TIMP2P16035 220 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 NUDT1P36639 197 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 CD86P42081 329 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 AFF3P51826 1226 aaKnown RBP18.47■□□□□ 0.55
PBX3-205ENST00000373492 ATXN3P54252 364 aaPredicted RBP18.47■□□□□ 0.55
PBX3-205ENST00000373492 TAS2R38P59533 333 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 NIPAL4Q0D2K0 466 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 TRAF2Q12933 501 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 ZSCAN30Q86W11 494 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 NDUFAF2Q8N183 169 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 C17orf53Q8N3J3 647 aaPredicted RBP18.47■□□□□ 0.55
PBX3-205ENST00000373492 RASGEF1CQ8N431 466 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 IMP4Q96G21 291 aaKnown RBP18.47■□□□□ 0.55
PBX3-205ENST00000373492 FEM1CQ96JP0 617 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 WDR24Q96S15 920 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 ORAI3Q9BRQ5 295 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 RSPH14Q9UHP6 348 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 PHTF1Q9UMS5 762 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 PCDHB9Q9Y5E1 797 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 RAI2Q9Y5P3 530 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 FADS3Q9Y5Q0 445 aa18.47■□□□□ 0.55
PBX3-205ENST00000373492 CACNA1EQ15878 2313 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 LAMA1P25391 3075 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 PGRMC1O00264 195 aaKnown RBP18.46■□□□□ 0.55
PBX3-205ENST00000373492 TM4SF5O14894 197 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 LATO43561 262 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 RNGTTO60942 597 aaKnown RBP18.46■□□□□ 0.55
PBX3-205ENST00000373492 NFKB1P19838 968 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 STIP1P31948 543 aaKnown RBP18.46■□□□□ 0.55
PBX3-205ENST00000373492 ABL2P42684 1182 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 TEAD4Q15561 434 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 CCNG2Q16589 344 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 KIAA1161Q6NSJ0 714 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 DGLUCYQ7Z3D6 616 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 PRPF39Q86UA1 669 aaKnown RBP18.46■□□□□ 0.55
PBX3-205ENST00000373492 TRIM69Q86WT6 500 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 C1orf54Q8WWF1 131 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 ATG4AQ8WYN0 398 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 NSMCE3Q96MG7 304 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 RBM15Q96T37 977 aaKnown RBP eCLIP18.46■□□□□ 0.55
PBX3-205ENST00000373492 TMEM121Q9BTD3 319 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 TDRD1Q9BXT4 1180 aaKnown RBP18.46■□□□□ 0.55
PBX3-205ENST00000373492 USP29Q9HBJ7 922 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 TM9SF3Q9HD45 589 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 TTC7AQ9ULT0 858 aaPredicted RBP18.46■□□□□ 0.55
PBX3-205ENST00000373492 ZNF148Q9UQR1 794 aa18.46■□□□□ 0.55
PBX3-205ENST00000373492 SCN8AQ9UQD0 1980 aa18.45■□□□□ 0.54
PBX3-205ENST00000373492 PGLSO95336 258 aa18.45■□□□□ 0.54
PBX3-205ENST00000373492 MMP2P08253 660 aa18.45■□□□□ 0.54
PBX3-205ENST00000373492 PRLRP16471 622 aa18.45■□□□□ 0.54
PBX3-205ENST00000373492 ACTN2P35609 894 aa18.45■□□□□ 0.54
PBX3-205ENST00000373492 TNNT3P45378 269 aaPredicted RBP18.45■□□□□ 0.54
PBX3-205ENST00000373492 GRIA4P48058 902 aa18.45■□□□□ 0.54
PBX3-205ENST00000373492 EPHB1P54762 984 aa18.45■□□□□ 0.54
PBX3-205ENST00000373492 RPS21P63220 83 aaKnown RBP18.45■□□□□ 0.54
PBX3-205ENST00000373492 RACK1P63244 317 aaKnown RBP18.45■□□□□ 0.54
PBX3-205ENST00000373492 SKOR1P84550 965 aa18.45■□□□□ 0.54
PBX3-205ENST00000373492 SNX1Q13596 522 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms