RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 SMIM14Q96QK8 99 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 DONSONQ9NYP3 566 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 PCDHB5Q9Y5E4 795 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.96■■□□□ 1.43
CDK9-201ENST00000373264 VNN2O95498 520 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 ATXN1LP0C7T5 689 aaKnown RBP23.96■■□□□ 1.43
CDK9-201ENST00000373264 LEPRP48357 1165 aaKnown RBP23.96■■□□□ 1.43
CDK9-201ENST00000373264 KCNQ1P51787 676 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 NDST2P52849 883 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 AQP4P55087 323 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 AAGABQ6PD74 315 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 GK5Q6ZS86 529 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 KYQ8NBH2 561 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 GIPC2Q8TF65 315 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 GDPD5Q8WTR4 605 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 C8orf48Q96LL4 319 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 ALG9Q9H6U8 611 aa23.96■■□□□ 1.43
CDK9-201ENST00000373264 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.96■■□□□ 1.43
CDK9-201ENST00000373264 A0A087X1B8 175 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 ATP5F1P24539 256 aaPredicted RBP23.95■■□□□ 1.43
CDK9-201ENST00000373264 INHBEP58166 350 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 MS4A2Q01362 244 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 CEACAM7Q14002 265 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 OR52E8Q6IFG1 317 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 OR52K2Q8NGK3 314 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 EXT2Q93063 718 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 SEMA3CQ99985 751 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 PRKD2Q9BZL6 878 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 SLC24A3Q9HC58 644 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 NCKIPSDQ9NZQ3 722 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 PLXNA3P51805 1871 aa23.95■■□□□ 1.43
CDK9-201ENST00000373264 A0A0D9SEW6 157 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 INPPL1O15357 1258 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 LDB2O43679 373 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 TCN1P20061 433 aaPredicted RBP23.95■■□□□ 1.42
CDK9-201ENST00000373264 YWHAQP27348 245 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 SEMA3AQ14563 771 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 POLD3Q15054 466 aaPredicted RBP23.95■■□□□ 1.42
CDK9-201ENST00000373264 MGAT5BQ3V5L5 792 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 KBTBD6Q86V97 674 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 HMGCLL1Q8TB92 370 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 BLOC1S5Q8TDH9 187 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 FBXO44Q9H4M3 255 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 ZBTB26Q9HCK0 441 aa23.95■■□□□ 1.42
CDK9-201ENST00000373264 UBFD1O14562 309 aaKnown RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 RNASEH1O60930 286 aaKnown RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 S1PR4O95977 384 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 PEX19P40855 299 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 CLEC6AQ6EIG7 209 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 RNF19BQ6ZMZ0 732 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 PAXIP1Q6ZW49 1069 aaPredicted RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 CPSF7Q8N684 471 aaKnown RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 OR13C4Q8NGS5 318 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 NSMCE3Q96MG7 304 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 GREB1Q4ZG55 1949 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 MROH6A6NGR9 719 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 OR1E1P30953 314 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 TRIP10Q15642 601 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 ZRSR2Q15696 482 aaKnown RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 NFE2Q16621 373 aaPredicted RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 TMEM173Q86WV6 379 aaPredicted RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 TMA16Q96EY4 203 aaKnown RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 DNAJC1Q96KC8 554 aaKnown RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 FAM193BQ96PV7 902 aaPredicted RBP23.94■■□□□ 1.42
CDK9-201ENST00000373264 VPS45Q9NRW7 570 aa23.94■■□□□ 1.42
CDK9-201ENST00000373264 IGLV3-10A0A075B6K4 115 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 TCAF2A6NFQ2 919 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 PPP6CO00743 305 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 PFKPQ01813 784 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 FAM83EQ2M2I3 478 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 RP9Q8TA86 221 aaKnown RBP23.93■■□□□ 1.42
CDK9-201ENST00000373264 BTN2A3PQ96KV6 586 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 TUBGCP5Q96RT8 1024 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 VTI1BQ9UEU0 232 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 VWA7Q9Y334 891 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 ATP6AP2A0A1C7CYW4 349 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 LRRC14BA6NHZ5 514 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 RAMP2O60895 175 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 ATP6AP2O75787 350 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 LTA4HP09960 611 aaKnown RBP23.93■■□□□ 1.42
CDK9-201ENST00000373264 PRAMEP78395 509 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 MRPS22P82650 360 aaKnown RBP23.93■■□□□ 1.42
CDK9-201ENST00000373264 FOXB2Q5VYV0 432 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 ZNF549Q6P9A3 640 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 LCA5Q86VQ0 697 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 PDSS2Q86YH6 399 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 RYBPQ8N488 228 aaPredicted RBP23.93■■□□□ 1.42
CDK9-201ENST00000373264 PTERQ96BW5 349 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 FUBP3Q96I24 572 aaKnown RBP eCLIP23.93■■□□□ 1.42
CDK9-201ENST00000373264 UBXN10Q96LJ8 280 aa23.93■■□□□ 1.42
CDK9-201ENST00000373264 CCDC189A1A4V9 331 aa23.92■■□□□ 1.42
CDK9-201ENST00000373264 ARHGEF37A1IGU5 675 aa23.92■■□□□ 1.42
CDK9-201ENST00000373264 NPHS1O60500 1241 aa23.92■■□□□ 1.42
CDK9-201ENST00000373264 IPO13O94829 963 aaKnown RBP23.92■■□□□ 1.42
CDK9-201ENST00000373264 SLC2A3P11169 496 aa23.92■■□□□ 1.42
CDK9-201ENST00000373264 PRKAA2P54646 552 aa23.92■■□□□ 1.42
CDK9-201ENST00000373264 ZNF423Q2M1K9 1284 aa23.92■■□□□ 1.42
CDK9-201ENST00000373264 ISLR2Q6UXK2 745 aa23.92■■□□□ 1.42
CDK9-201ENST00000373264 TAS1R1Q7RTX1 841 aa23.92■■□□□ 1.42
CDK9-201ENST00000373264 PIWIL4Q7Z3Z4 852 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms