RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 PREPLQ4J6C6 727 aaPredicted RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 ZNF789Q5FWF6 425 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 RBM20Q5T481 1227 aaKnown RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 VWA5B1Q5TIE3 1220 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 BRSK1Q8TDC3 778 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 HEXDCQ8WVB3 486 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 TRMT2BQ96GJ1 504 aaKnown RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 PSKH2Q96QS6 385 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 MGME1Q9BQP7 344 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 IL23AQ9NPF7 189 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 SPG21Q9NZD8 308 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 UBA2Q9UBT2 640 aaPredicted RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 DLX3O60479 287 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 BAIAP3O94812 1187 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 S1PR4O95977 384 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 PGM1P36871 562 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 PPP3CCP48454 512 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 ACVR1Q04771 509 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 ILF2Q12905 390 aaKnown RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 RFTN1Q14699 578 aaPredicted RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 VEPH1Q14D04 833 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 SLC14A2Q15849 920 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 ADGRF1Q5T601 910 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 METTL21CQ5VZV1 264 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 CHST9Q7L1S5 443 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 C16orf59Q7L2K0 433 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 SETD3Q86TU7 594 aaPredicted RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 SPATA6LQ8N4H0 392 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 RBM15BQ8NDT2 890 aaKnown RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 TTC8Q8TAM2 541 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 BLOC1S5Q8TDH9 187 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 PRICKLE1Q96MT3 831 aaPredicted RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 YME1L1Q96TA2 773 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 NDNQ99608 321 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 OLFM1Q99784 485 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 HERC2P3Q9BVR0 1158 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 CINPQ9BW66 212 aaPredicted RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 KLF16Q9BXK1 252 aaPredicted RBP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 RNF38Q9H0F5 515 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 C1orf21Q9H246 121 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 RNPEPL1Q9HAU8 725 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
CSTF2-201ENST00000372972 VWA7Q9Y334 891 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 YIPF1Q9Y548 306 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 KCTD3Q9Y597 815 aa13.47□□□□□ -0.25
CSTF2-201ENST00000372972 PTPRSQ13332 1948 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 MAGEC1O60732 1142 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 PEX11AO75192 247 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 ANP32DO95626 131 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 NDST3O95803 873 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 CHRNGP07510 517 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 RHOCP08134 193 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 GM2AP17900 193 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 RPL14P50914 215 aaKnown RBP13.46□□□□□ -0.25
CSTF2-201ENST00000372972 PRKAA1Q13131 559 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 ARL13AQ5H913 290 aaPredicted RBP13.46□□□□□ -0.25
CSTF2-201ENST00000372972 HECTD2Q5U5R9 776 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 AGAP9Q5VTM2 703 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 TMC7Q7Z402 723 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 PDCD6IPQ8WUM4 868 aaKnown RBP13.46□□□□□ -0.25
CSTF2-201ENST00000372972 SCG3Q8WXD2 468 aaKnown RBP13.46□□□□□ -0.25
CSTF2-201ENST00000372972 TBATAQ96M53 351 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 NUDCD1Q96RS6 583 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 DDX50Q9BQ39 737 aaKnown RBP13.46□□□□□ -0.25
CSTF2-201ENST00000372972 EBF2Q9HAK2 575 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 IGSF5Q9NSI5 407 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 NOP53Q9NZM5 478 aaKnown RBP13.46□□□□□ -0.25
CSTF2-201ENST00000372972 AGO1Q9UL18 857 aaKnown RBP13.46□□□□□ -0.25
CSTF2-201ENST00000372972 RIMKLBQ9ULI2 386 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 TBC1D30Q9Y2I9 924 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.46□□□□□ -0.25
CSTF2-201ENST00000372972 ACTL7AQ9Y615 435 aa13.46□□□□□ -0.25
CSTF2-201ENST00000372972 BPTFQ12830 3046 aa13.46□□□□□ -0.26
CSTF2-201ENST00000372972 MIA3Q5JRA6 1907 aa13.46□□□□□ -0.26
CSTF2-201ENST00000372972 A0A1B0GVM2 712 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 TCAF2A6NFQ2 919 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 ZBBXA8MT70 800 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 MATN2O00339 956 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 CCL22O00626 93 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 PIGNO95427 931 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 GLP2RO95838 553 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 LMNAP02545 664 aaKnown RBP13.45□□□□□ -0.26
CSTF2-201ENST00000372972 TFEBP19484 476 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 NCF2P19878 526 aaPredicted RBP13.45□□□□□ -0.26
CSTF2-201ENST00000372972 CES1P23141 567 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 PLD1Q13393 1074 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 RAB33AQ14088 237 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 CSHL1Q14406 222 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 GALNT3Q14435 633 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 DNAL1Q4LDG9 190 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 KLC3Q6P597 504 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 DDX53Q86TM3 631 aaKnown RBP13.45□□□□□ -0.26
CSTF2-201ENST00000372972 GPR150Q8NGU9 434 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 MOCOSQ96EN8 888 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 TRIB3Q96RU7 358 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 GPAMQ9HCL2 828 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 MARCH4Q9P2E8 410 aaPredicted RBP13.45□□□□□ -0.26
CSTF2-201ENST00000372972 ARIH1Q9Y4X5 557 aaPredicted RBP13.45□□□□□ -0.26
CSTF2-201ENST00000372972 ARL5AQ9Y689 179 aa13.45□□□□□ -0.26
CSTF2-201ENST00000372972 C2orf78A6NCI8 922 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms