RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 ZFP90Q8TF47 636 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 PHOX2BQ99453 314 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 CCSER2Q9H7U1 834 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 VANGL2Q9ULK5 521 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 NR2E3Q9Y5X4 410 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 COPG1Q9Y678 874 aaKnown RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 CROCCQ5TZA2 2017 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 A0A1W2PRG6 482 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 G3V2T6 193 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 TK2O00142 265 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 DFFAO00273 331 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 TPPPO94811 219 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 SNAP29O95721 258 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 FTH1P02794 183 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 NCAM1P13591 858 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 NCK1P16333 377 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 TPH1P17752 444 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 MSH3P20585 1137 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 MMP8P22894 467 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 HLCSP50747 726 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 GTF2A2P52657 109 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 NFIAQ12857 509 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 DDR2Q16832 855 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 CCDC142Q17RM4 750 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 TBRG1Q3YBR2 411 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 LINC00523Q86TU6 105 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZC3H3Q8IXZ2 948 aaKnown RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 JPH3Q8WXH2 748 aaPredicted RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 BEX2Q9BXY8 128 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 ELOVL6Q9H5J4 265 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 IMPAD1Q9NX62 359 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 OGDHLQ9ULD0 1010 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 TRAF6Q9Y4K3 522 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 MYH11P35749 1972 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 GOLGB1Q14789 3259 aaKnown RBP11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 BCL9LQ86UU0 1499 aa11.29□□□□□ -0.6
SYNPO2L-201ENST00000372873 SLC15A5A6NIM6 579 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 NBNO60934 754 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 SNNO75324 88 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 CST1P01037 141 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 TCEAL1Q15170 157 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 STILQ15468 1287 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 TRIQKQ629K1 86 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 PLET1Q6UQ28 207 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 USP43Q70EL4 1123 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 ADGRF2Q8IZF7 708 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 TARS2Q9BW92 718 aaKnown RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 UGT2B28Q9BY64 529 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 C20orf27Q9GZN8 174 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 KAT8Q9H7Z6 458 aaKnown RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 RIC8BQ9NVN3 520 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 FNDC3AQ9Y2H6 1198 aaKnown RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 GPSM3Q9Y4H4 160 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 C3orf70A6NLC5 250 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 EFCAB9A8MZ26 197 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 AIREO43918 545 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 BCAS1O75363 584 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 GPIP06744 558 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 MBL2P11226 248 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 CYP4B1P13584 511 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 RARRES1P49788 294 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 CYP4F2P78329 520 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 CYP4F3Q08477 520 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 SURF1Q15526 300 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 VPS26BQ4G0F5 336 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 CCDC58Q4VC31 144 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 PIWIL4Q7Z3Z4 852 aaKnown RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 OR8H3Q8N146 312 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 PMEPA1Q969W9 287 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 STOML2Q9UJZ1 356 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 TESMINQ9Y4I5 508 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 CYP2F1P24903 491 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 JAK3P52333 1124 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 SIM2Q14190 667 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 PCLAFQ15004 111 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 SKIV2LQ15477 1246 aaKnown RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZNF362Q5T0B9 420 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 SWSAP1Q6NVH7 229 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZNF517Q6ZMY9 492 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 RNF111Q6ZNA4 994 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 HDDC2Q7Z4H3 204 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 RALGPS2Q86X27 583 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 GRAMD2AQ8IUY3 354 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 CENPLQ8N0S6 344 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 HSD17B14Q9BPX1 270 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 HOPXQ9BPY8 73 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 DCSTAMPQ9H295 470 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 NENFQ9UMX5 172 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 UGT2A1Q9Y4X1 527 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 ASTN2O75129 1339 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 MYH3P11055 1940 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 A0A0J9YYE9 177 aa11.28□□□□□ -0.6
SYNPO2L-201ENST00000372873 PRR23AA6NEV1 266 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms