RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MRPL42Q9Y6G3 142 aaKnown RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 UNC13BO14795 1591 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 NCANO14594 1321 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 TMEM150BA6NC51 233 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 ISM1B1AKI9 464 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 PRKAR1AP10644 381 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 ABCG1P45844 678 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 BNC1Q01954 994 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 USP41Q3LFD5 358 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 ANKRD52Q8NB46 1076 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 PANX1Q96RD7 426 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 SEMA3CQ99985 751 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 FUCA2Q9BTY2 467 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 IDI2Q9BXS1 227 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 CAB39LQ9H9S4 337 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 AASDHPPTQ9NRN7 309 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 ZNF222Q9UK12 451 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 PTCH2Q9Y6C5 1203 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 KCNE2Q9Y6J6 123 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 TECPR2O15040 1411 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 SRRM3A6NNA2 597 aaPredicted RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 CAPGP40121 348 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 CNTN2Q02246 1040 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 PUDPQ08623 228 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 CAMK1Q14012 370 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 DENND5AQ6IQ26 1287 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 DHDDSQ86SQ9 333 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 OAFQ86UD1 273 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 GPR156Q8NFN8 814 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 BLOC1S4Q9NUP1 217 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 SETD1BQ9UPS6 1966 aaKnown RBP11.58□□□□□ -0.55
VCL-202ENST00000372755 FAM92AA1XBS5 289 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 RPL22P35268 128 aaKnown RBP11.58□□□□□ -0.55
VCL-202ENST00000372755 SMCO1Q147U7 214 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 PDK3Q15120 406 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 ZIK1Q3SY52 487 aaPredicted RBP11.58□□□□□ -0.55
VCL-202ENST00000372755 NOMO2Q5JPE7 1267 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 GPC2Q8N158 579 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 CDYL2Q8N8U2 506 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 OR4A15Q8NGL6 344 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 TCF12Q99081 682 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 CORO1BQ9BR76 489 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 C3orf14Q9HBI5 128 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 GIT1Q9Y2X7 761 aa11.58□□□□□ -0.55
VCL-202ENST00000372755 GPC6Q9Y625 555 aaPredicted RBP11.58□□□□□ -0.55
VCL-202ENST00000372755 EML1O00423 815 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 HDAC3O15379 428 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 TMCC2O75069 709 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 DBTP11182 482 aaKnown RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 UBA1P22314 1058 aaKnown RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 BEX3Q00994 111 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 ZDHHC20Q5W0Z9 365 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 KCTD4Q8WVF5 259 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 RRAGCQ9HB90 399 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 PNPLA3Q9NST1 481 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 RSL24D1Q9UHA3 163 aaKnown RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 RAB23Q9ULC3 237 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 SAMHD1Q9Y3Z3 626 aaKnown RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 CPS1P31327 1500 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 BTNL10A8MVZ5 291 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 AZIN1O14977 448 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 FARP2O94887 1054 aaPredicted RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 LYNP07948 512 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 TCF4P15884 667 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 PTPRAP18433 802 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 GABRB2P47870 512 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 STARP49675 285 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 AIF1P55008 147 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 ABRQ12979 859 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 GRM3Q14832 879 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 FAM98AQ8NCA5 519 aaKnown RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 COX4I2Q96KJ9 171 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 DSN1Q9H410 356 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 BTRCQ9Y297 605 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 USP20Q9Y2K6 914 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 TRIM17Q9Y577 477 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 TARBP1Q13395 1621 aaKnown RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 SUV39H1O43463 412 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 UNC5CO95185 931 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 FGF1P05230 155 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 ADH1AP07327 375 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 SERPINA6P08185 405 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 BUD31P41223 144 aaPredicted RBP11.58□□□□□ -0.56
VCL-202ENST00000372755 RAB2AP61019 212 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 C1orf186Q6ZWK4 172 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 RBFAQ8N0V3 343 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 HELQQ8TDG4 1101 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 BAP1Q92560 729 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 ERLEC1Q96DZ1 483 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 CDCA5Q96FF9 252 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 SLC47A1Q96FL8 570 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 NDNQ99608 321 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 OSBPL11Q9BXB4 747 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 RNF208Q9H0X6 261 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 MAGEB3O15480 346 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 GTF2BQ00403 316 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 FKBP1CQ5VVH2 108 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 FAAH2Q6GMR7 532 aa11.58□□□□□ -0.56
VCL-202ENST00000372755 KLHL35Q6PF15 583 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms