RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FAM131BQ86XD5 332 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 SEMA6BQ9H3T3 888 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 HPSEQ9Y251 543 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 SIK3Q9Y2K2 1263 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 IQCMA0A1B0GVH7 501 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 M0QX08 132 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 AP3D1O14617 1153 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 AP5Z1O43299 807 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 NDUFS2O75306 463 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 SUPT7LO94864 414 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 NUDT7P0C024 238 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 PBLDP30039 288 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 OTOP2Q7RTS6 562 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 ZNF540Q8NDQ6 660 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 PCDH19Q8TAB3 1148 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 TAMM41Q96BW9 452 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 LRMDAQ9H2I8 198 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 ARMC7Q9H6L4 198 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 AP4E1Q9UPM8 1137 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 CASZ1Q86V15 1759 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 ORC5O43913 435 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 PSMD10O75832 226 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 GLRA2P23416 452 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 FSHRP23945 695 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 USP4Q13107 963 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 CIR1Q86X95 450 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 FBXO36Q8NEA4 188 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 FBXO22Q8NEZ5 403 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 OR52K2Q8NGK3 314 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 SNIP1Q8TAD8 396 aaKnown RBP14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 SALL3Q9BXA9 1300 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 C5orf51A6NDU8 294 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 FCHO1O14526 889 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 OR7A10O76100 309 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 VMACQ2NL98 169 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 RETSATQ6NUM9 610 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 RPTNQ6XPR3 784 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 SLC2A14Q8TDB8 520 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 GPATCH2LQ9NWQ4 482 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 SPATA7Q9P0W8 599 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 EIF3KQ9UBQ5 218 aaKnown RBP14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 VPS9D1Q9Y2B5 631 aa14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 AAR2Q9Y312 384 aaKnown RBP14.13□□□□□ -0.15
RAPGEF1-202ENST00000372190 ZSCAN5CA6NGD5 496 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 CPSF4O95639 269 aaKnown RBP14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 ZNF14P17017 642 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 LAG3P18627 525 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 RAB5BP61020 215 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 SSX2Q16385 188 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 CCDC58Q4VC31 144 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 LBX2Q6XYB7 198 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 MAP4K3Q8IVH8 894 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 TEX47Q8TBZ9 253 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 ZSCAN5AQ9BUG6 496 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 CDC42EP4Q9H3Q1 356 aaKnown RBP14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 TLE6Q9H808 572 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 TREM1Q9NP99 234 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 LIMD1Q9UGP4 676 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 COL1A2P08123 1366 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 TBC1D3BA6NDS4 549 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 CD2P06729 351 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 PCNAP12004 261 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 EPB42P16452 691 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 SDC2P34741 201 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 RENBPP51606 427 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 RIPK1Q13546 671 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 CA9Q16790 459 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 UGT3A1Q6NUS8 523 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 IL31RAQ8NI17 732 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 ITFG1Q8TB96 612 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 GPATCH1Q9BRR8 931 aaKnown RBP14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 C11orf49Q9H6J7 331 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 AASSQ9UDR5 926 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 TNFSF13BQ9Y275 285 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 MICAL2O94851 1124 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 YES1P07947 543 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 GPC1P35052 558 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 FDFT1P37268 417 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 NME5P56597 212 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 RGL4Q8IZJ4 473 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 MSANTD3Q96H12 275 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 A0A0A6YYK5 440 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 PRAMEF33A0A0G2JMD5 474 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 CHURC1-FNTBB4DL54 471 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 PRAMEF10O60809 474 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 AKAP3O75969 853 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 MZF1P28698 734 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 CARTPTQ16568 116 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 PAGE2BQ5JRK9 111 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 OGFRL1Q5TC84 451 aaPredicted RBP14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 LGI2Q8N0V4 545 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 DEPDC4Q8N2C3 294 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 FBXL16Q8N461 479 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 ING5Q8WYH8 240 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 ANKRD6Q9Y2G4 727 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 HES2Q9Y543 173 aa14.12□□□□□ -0.15
RAPGEF1-202ENST00000372190 C15orf38-AP3S2A0A0A6YYH1 394 aa14.11□□□□□ -0.15
RAPGEF1-202ENST00000372190 MOXD2PA6NHM9 499 aa14.11□□□□□ -0.15
RAPGEF1-202ENST00000372190 ZW10O43264 779 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms