RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZNF470Q6ECI4 717 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 TRAPPC5Q8IUR0 188 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 IQCF2Q8IXL9 164 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 TNFRSF25Q93038 417 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 REXO4Q9GZR2 422 aaKnown RBP13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 AHSPQ9NZD4 102 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 DNPEPQ9ULA0 475 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 COMMD3-BMI1R4GMX3 469 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 ATG7O95352 703 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 POU1F1P28069 291 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 TKTP29401 623 aaKnown RBP13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 CD86P42081 329 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 COTL1Q14019 142 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 ATAT1Q5SQI0 421 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 RNF19BQ6ZMZ0 732 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 FIG4Q92562 907 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 SMAD5Q99717 465 aaKnown RBP13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 VPS51Q9UID3 782 aa13.4□□□□□ -0.26
RAPGEF1-201ENST00000372189 BTNL10A8MVZ5 291 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 CPSF4O95639 269 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PDHA2P29803 388 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PRKCIP41743 596 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 OTUD3Q5T2D3 398 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 SWT1Q5T5J6 900 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PHF13Q86YI8 300 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 STK40Q8N2I9 435 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PYDC1Q8WXC3 89 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 SLC6A15Q9H2J7 730 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 SRRDQ9UH36 339 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 RPL26L1Q9UNX3 145 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PDE2AO00408 941 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 RXRGP48443 463 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 APLP1P51693 650 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ACLYP53396 1101 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 MBTD1Q05BQ5 628 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PDZK1Q5T2W1 519 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 TRIQKQ629K1 86 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 SCARA3Q6AZY7 606 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 TTC27Q6P3X3 843 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 KLHL35Q6PF15 583 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 VSTM1Q6UX27 236 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 C4orf32Q8N8J7 132 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 TOR1AIP2Q8NFQ8 470 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ACOX2Q99424 681 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 UQCC2Q9BRT2 126 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 SLC25A23Q9BV35 468 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 SNRNP25Q9BV90 132 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 MIR1-1HGQ9H1L0 117 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 LRMDAQ9H2I8 198 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 NMRAL1Q9HBL8 299 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ACP6Q9NPH0 428 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 CATSPERZQ9NTU4 200 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ING3Q9NXR8 418 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 TAS2R14Q9NYV8 317 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 CFAP97Q9P2B7 532 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 CORO1CQ9ULV4 474 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 EDARQ9UNE0 448 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 DCXO43602 365 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PRMT3O60678 531 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 IL1BP01584 269 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ERBB2P04626 1255 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PSMA3P25788 255 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ROR2Q01974 943 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 FPGSQ05932 587 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 TRAF3Q13114 568 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 AUHQ13825 339 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 POM121L1PQ3SYA9 428 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ATP6V1C2Q8NEY4 427 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 MAGEC3Q8TD91 643 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PFDN2Q9UHV9 154 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 A0A096LPK6 155 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 TK2O00142 265 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 SHBGP04278 402 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 FMO4P31512 558 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 INSCQ1MX18 579 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 MIIPQ5JXC2 388 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 BSNDQ8WZ55 320 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PIF1Q9H611 641 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ADAMTSL3P82987 1691 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 CCDC154A6NI56 674 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 FAM47E-STBD1D6RA91 191 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 TGFB1I1O43294 461 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 EOMESO95936 686 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 MATKP42679 507 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 MAGEA10P43363 369 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 BHLHE22Q8NFJ8 381 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 PCYOX1Q9UHG3 505 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF112Q9UJU3 913 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 DUSP12Q9UNI6 340 aa13.39□□□□□ -0.27
RAPGEF1-201ENST00000372189 ARL5CA6NH57 179 aa13.38□□□□□ -0.27
RAPGEF1-201ENST00000372189 NEDD8-MDP1E9PL57 170 aa13.38□□□□□ -0.27
RAPGEF1-201ENST00000372189 KRT36O76013 467 aa13.38□□□□□ -0.27
RAPGEF1-201ENST00000372189 VAV1P15498 845 aa13.38□□□□□ -0.27
RAPGEF1-201ENST00000372189 PRKACAP17612 351 aa13.38□□□□□ -0.27
RAPGEF1-201ENST00000372189 TNNI3P19429 210 aa13.38□□□□□ -0.27
RAPGEF1-201ENST00000372189 EPS8Q12929 822 aa13.38□□□□□ -0.27
RAPGEF1-201ENST00000372189 NR6A1Q15406 480 aa13.38□□□□□ -0.27
RAPGEF1-201ENST00000372189 ANKRD26P1Q6NSI1 321 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms