RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NUAK1O60285 661 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CEP104O60308 925 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 LPXNO60711 386 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 RNASEH2AO75792 299 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 UBXN7O94888 489 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 RTN3O95197 1032 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 TBX18O95935 607 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CLEC2LP0C7M8 214 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 NCAM1P13591 858 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 EPCAMP16422 314 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TCP1P17987 556 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 PEX2P28328 305 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SDC4P31431 198 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 LSP1P33241 339 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 PCK1P35558 622 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 GJC1P36383 396 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SSR1P43307 286 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 SULT1E1P49888 294 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ARSEP51690 589 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CLCN4P51793 760 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 LINC00310P59036 64 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ALDH6A1Q02252 535 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 CREMQ03060 361 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TWF1Q12792 350 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 EIF4EBP2Q13542 120 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 ACAP1Q15027 740 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 RAB30Q15771 203 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CA9Q16790 459 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CDO1Q16878 200 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SLC25A52Q3SY17 297 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 KCNT1Q5JUK3 1230 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 LRRC38Q5VT99 294 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CPZQ66K79 652 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SPOCD1Q6ZMY3 1216 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 BEND5Q7L4P6 421 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 DNAJB7Q7Z6W7 309 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 ADGRD2Q7Z7M1 963 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TMEM150AQ86TG1 271 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TAC4Q86UU9 113 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 MON1AQ86VX9 555 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 C1QL4Q86Z23 238 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SUGP1Q8IWZ8 645 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 RHOT1Q8IXI2 618 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 KATNAL2Q8IYT4 538 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 TDHQ8IZJ6 230 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 RASGEF1CQ8N431 466 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 PRR18Q8N4B5 295 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 OR2C3Q8N628 320 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CMASQ8NFW8 434 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 DQX1Q8TE96 717 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 GDPD5Q8WTR4 605 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 RAPGEF5Q92565 580 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CASP10Q92851 521 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 FBXO32Q969P5 355 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 SKA1Q96BD8 255 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 PBKQ96KB5 322 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CAPZA3Q96KX2 299 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 CARD6Q9BX69 1037 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 FBXO44Q9H4M3 255 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 PRDM12Q9H4Q4 367 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 FAM204AQ9H8W3 233 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ZWILCHQ9H900 591 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 POPDC2Q9HBU9 364 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 ZNF334Q9HCZ1 680 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 WDR6Q9NNW5 1121 aaKnown RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 PIGVQ9NUD9 493 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 GPATCH2LQ9NWQ4 482 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 LCMT1Q9UIC8 334 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 FBXW11Q9UKB1 542 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 MAFFQ9ULX9 164 aa3.66□□□□□ -1.82
MCF2-202ENST00000370573 MAGED2Q9UNF1 606 aaPredicted RBP3.66□□□□□ -1.82
MCF2-202ENST00000370573 SYNJ2BP-COX16A0A087WUM0 186 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 ZNF840PA6NDX5 716 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 M0QYT0 321 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 CES2O00748 559 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 MDM4O15151 490 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 PSTPIP1O43586 416 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 TADA3O75528 432 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 RNF8O76064 485 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 IGLV3-25P01717 112 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 CD48P09326 243 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 PNLIPP16233 465 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 ELF1P32519 619 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 ARL4AP40617 200 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 ALDH1A3P47895 512 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 CXCR3P49682 368 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 SEPHS1P49903 392 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 EPHB3P54753 998 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 RWDD2BP57060 319 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 MVKQ03426 396 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 ADCY2Q08462 1091 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 NME3Q13232 169 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 TUBB2AQ13885 445 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 TAZQ16635 292 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 WHAMMP3Q1A5X7 153 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 SMTNL2Q2TAL5 461 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 CT83Q5H943 113 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 BTBD8Q5XKL5 378 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 SCYL2Q6P3W7 929 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms