RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TBXAS1P24557 533 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-204ENST00000369530 NR1H2P55055 460 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 WASHC5Q12768 1159 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 HLTFQ14527 1009 aaKnown RBP eCLIP6.95□□□□□ -1.3
CSDE1-204ENST00000369530 RASA2Q15283 850 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 RPS6KA1Q15418 735 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 CRY1Q16526 586 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 LLGL2Q6P1M3 1020 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 TRMT10CQ7L0Y3 403 aaKnown RBP6.95□□□□□ -1.3
CSDE1-204ENST00000369530 PEX26Q7Z412 305 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 CLNKQ7Z7G1 428 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 PEX13Q92968 403 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 TTC17Q96AE7 1141 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 RUNDC3BQ96NL0 473 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 DHRS9Q9BPW9 319 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 PI4K2AQ9BTU6 479 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 SLC2A11Q9BYW1 496 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 NDEL1Q9GZM8 345 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 CISHQ9NSE2 258 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 USP36Q9P275 1121 aaKnown RBP6.95□□□□□ -1.3
CSDE1-204ENST00000369530 PCSK1NQ9UHG2 260 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 DPP7Q9UHL4 492 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 RAPGEFL1Q9UHV5 662 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 INPP5FQ9Y2H2 1132 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 TIMM13Q9Y5L4 95 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-204ENST00000369530 TMEM120BA0PK00 339 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 NOTOA8MTQ0 251 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 PRPF4O43172 522 aaKnown RBP eCLIP6.95□□□□□ -1.35e-7■■■■□ 22.3
CSDE1-204ENST00000369530 KLHL2O95198 593 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 PEX11BO96011 259 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 SP9P0CG40 484 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 GJC1P36383 396 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 CCR3P51677 355 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 SGSHP51688 502 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 SLC5A3P53794 718 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 PDK3Q15120 406 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 SLC18A3Q16572 532 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 CLEC16AQ2KHT3 1053 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 CTXN3Q4LDR2 81 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 XKR5Q6UX68 686 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 TMC7Q7Z402 723 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 ADAMTS16Q8TE57 1224 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 TBC1D23Q9NUY8 699 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 GGT7Q9UJ14 662 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 DOCK9Q9BZ29 2069 aa6.95□□□□□ -1.3
CSDE1-204ENST00000369530 PRR23AA6NEV1 266 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CLDN5O00501 218 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 DPYSL4O14531 572 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 KRT19P08727 400 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 KLRC2P26717 231 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 FOXN2P32314 431 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 LIMK1P53667 647 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 GPC5P78333 572 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CDK16Q00536 496 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 DMWDQ09019 674 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 SCAPQ12770 1279 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 MLF2Q15773 248 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 KCNJ8Q15842 424 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 MPP7Q5T2T1 576 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 PMF1Q6P1K2 205 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 MON1BQ7L1V2 547 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ADIPOR2Q86V24 386 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 VSIG1Q86XK7 387 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 RELL1Q8IUW5 271 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 SCAMP5Q8TAC9 235 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 TMEM176AQ96HP8 235 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ZNF419Q96HQ0 510 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 HES6Q96HZ4 224 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 NT5C1BQ96P26 610 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 PCDHB18PQ96TA0 734 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ERP44Q9BS26 406 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 C1orf21Q9H246 121 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 MOV10Q9HCE1 1003 aaKnown RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ZNF304Q9HCX3 659 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 RAB26Q9ULW5 256 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 WASF2Q9Y6W5 498 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 PRR19A6NJB7 356 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 KRT6AP02538 564 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 KRT6BP04259 564 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CYP17A1P05093 508 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ASGR2P07307 311 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 KRT6CP48668 564 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 DAOAP59103 153 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 DR1Q01658 176 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CDK18Q07002 472 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CBLBQ13191 982 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 MPP2Q14168 576 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 INSCQ1MX18 579 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CYP4A22Q5TCH4 519 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 PPP4R4Q6NUP7 873 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 TMC5Q6UXY8 1006 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ZNF571Q7Z3V5 609 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CENPSQ8N2Z9 138 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 FBXL13Q8NEE6 735 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 FRS2Q8WU20 508 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CEP44Q9C0F1 390 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ARHGEF4Q9NR80 690 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 THAP1Q9NVV9 213 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 APEX2Q9UBZ4 518 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 TJP2Q9UDY2 1190 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms