RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 OXA1LQ15070 435 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 NCF4Q15080 339 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 STXBP2Q15833 593 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 CDONQ4KMG0 1287 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 CTRB2Q6GPI1 263 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 CFAP77Q6ZQR2 320 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 SSX9Q7RTT3 188 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 LRRC57Q8N9N7 239 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 SPATA9Q9BWV2 254 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 UGT2B28Q9BY64 529 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 PCIF1Q9H4Z3 704 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 NCANO14594 1321 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 HDAC3O15379 428 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 GZMAP12544 262 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 CKMT2P17540 419 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 ELK3P41970 407 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 PTGIRP43119 386 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 SNAPC2Q13487 334 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 CCNIQ14094 377 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 RFX4Q33E94 735 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 LSM12Q3MHD2 195 aaKnown RBP10.48□□□□□ -0.73
PRDM1-201ENST00000369089 NANOGP8Q6NSW7 305 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 CHMP1BQ7LBR1 199 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 TRNT1Q96Q11 434 aaKnown RBP10.48□□□□□ -0.73
PRDM1-201ENST00000369089 SPATA31A6Q5VVP1 1343 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 ADGRB2O60241 1585 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 POTEMA6NI47 508 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 KCNJ13O60928 360 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 ABCB7O75027 752 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 CYP7B1O75881 506 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 SOAT2O75908 522 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 PDHA2P29803 388 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 PRMT2P55345 433 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 GRM4Q14833 912 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 FAM76BQ5HYJ3 339 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 CDKL4Q5MAI5 379 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 SLX4IPQ5VYV7 408 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 HIPK1Q86Z02 1210 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 NKX2-3Q8TAU0 364 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 TOP1MTQ969P6 601 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 ACCSQ96QU6 501 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 C12orf57Q99622 126 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 MECRQ9BV79 373 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 WDR11Q9BZH6 1224 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 DCSTAMPQ9H295 470 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 ITM2CQ9NQX7 267 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 STOX2Q9P2F5 926 aaPredicted RBP10.48□□□□□ -0.73
PRDM1-201ENST00000369089 EIF3KQ9UBQ5 218 aaKnown RBP10.48□□□□□ -0.73
PRDM1-201ENST00000369089 TIMM22Q9Y584 194 aa10.48□□□□□ -0.73
PRDM1-201ENST00000369089 DDX3YO15523 660 aaKnown RBP10.47□□□□□ -0.73
PRDM1-201ENST00000369089 ATE1O95260 518 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 TGM6O95932 706 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 APOC3P02656 99 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 ITGA2P17301 1181 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 ACTR2P61160 394 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 RPP38P78345 283 aaKnown RBP10.47□□□□□ -0.73
PRDM1-201ENST00000369089 ZNF33BQ06732 778 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 RPA4Q13156 261 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 CDKL3Q8IVW4 592 aaPredicted RBP10.47□□□□□ -0.73
PRDM1-201ENST00000369089 METTL4Q8N3J2 472 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 FIBCD1Q8N539 461 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 ZNF276Q8N554 614 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 TRPV3Q8NET8 790 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 FBXO30Q8TB52 745 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 METTL6Q8TCB7 284 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 NUSAP1Q9BXS6 441 aaKnown RBP10.47□□□□□ -0.73
PRDM1-201ENST00000369089 BRD9Q9H8M2 597 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 C17orf75Q9HAS0 396 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 BFARQ9NZS9 450 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 ZNF451Q9Y4E5 1061 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 RGS10O43665 173 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 FADS2O95864 444 aaKnown RBP10.47□□□□□ -0.73
PRDM1-201ENST00000369089 C8BP07358 591 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 BPGMP07738 259 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 THRBP10828 461 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 S100A2P29034 98 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 PSMD4P55036 377 aaKnown RBP10.47□□□□□ -0.73
PRDM1-201ENST00000369089 MPP1Q00013 466 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 C21orf62-AS1Q17RA5 79 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 MGAT5BQ3V5L5 792 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 DESI1Q6ICB0 168 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 LINC00523Q86TU6 105 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 MCOLN3Q8TDD5 553 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 BLOC1S5Q8TDH9 187 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 GAD1Q99259 594 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 DHX35Q9H5Z1 703 aaKnown RBP10.47□□□□□ -0.73
PRDM1-201ENST00000369089 CCDC167Q9P0B6 97 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 H3BM21 787 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 MEIS1O00470 390 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 NUPL2O15504 423 aaKnown RBP10.47□□□□□ -0.73
PRDM1-201ENST00000369089 KCNN4O15554 427 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 CD79BP40259 229 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 PRKD1Q15139 912 aaPredicted RBP10.47□□□□□ -0.73
PRDM1-201ENST00000369089 CATSPER4Q7RTX7 472 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 RIT1Q92963 219 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 CRAMP1Q96RY5 1269 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 TRAF6Q9Y4K3 522 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 MAU2Q9Y6X3 613 aa10.47□□□□□ -0.73
PRDM1-201ENST00000369089 TRAV20A0A0B4J274 112 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 PRAMEF33A0A0G2JMD5 474 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms