RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 BCLAF3A2AJT9 711 aaKnown RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 C2orf71A6NGG8 1288 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 EEF2KO00418 725 aaKnown RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 SIGLEC6O43699 453 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 PPFIA2O75334 1257 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 VNN2O95498 520 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 SLC2A3P11169 496 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 GOT1P17174 413 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 IVDP26440 423 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 CCR1P32246 355 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 OR1D2P34982 312 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 ACTN2P35609 894 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 CTSKP43235 329 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 GPR15P49685 360 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 TPI1P60174 286 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 DUSP4Q13115 394 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 SEMA3BQ13214 749 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 HSP90B2PQ58FF3 399 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 NCBP2-AS2Q69YL0 99 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 UNQ6494/PRO21346Q6UXR6 183 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 C4orf22Q6V702 233 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 PDZD4Q76G19 769 aaPredicted RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 SCD5Q86SK9 330 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 C2CD4AQ8NCU7 369 aaPredicted RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 ZNF461Q8TAF7 563 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 OVCA2Q8WZ82 227 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 NELL1Q92832 810 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 TAAR9Q96RI9 348 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 HAPLN3Q96S86 360 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 CDK5RAP1Q96SZ6 601 aaKnown RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 TTLL2Q9BWV7 592 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 TKTL2Q9H0I9 626 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 MS4A5Q9H3V2 200 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.93□□□□□ -0.98
TPM3-213ENST00000368545 ARHGEF38Q9NXL2 777 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 SAE1Q9UBE0 346 aaPredicted RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 RNF112Q9ULX5 631 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 SMG5Q9UPR3 1016 aaKnown RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 R4GN57 208 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 CAPN8A6NHC0 703 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 HACD1B0YJ81 288 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 C2CD4DB7Z1M9 353 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 H7C0C1 242 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 NRG2O14511 850 aaPredicted RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 DNALI1O14645 258 aaPredicted RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 AP1G1O43747 822 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 RRP9O43818 475 aaKnown RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 IFNB1P01574 187 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 RETP07949 1114 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 ATP5OP48047 213 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 ITGA8P53708 1063 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 MTA1Q13330 715 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 DPYSQ14117 519 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 ZNF267Q14586 743 aaPredicted RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 TESK1Q15569 626 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 TRIP13Q15645 432 aaPredicted RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 P3H1Q32P28 736 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 CFAP58Q5T655 872 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 SDHAF4Q5VUM1 108 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 IZUMO3Q5VZ72 239 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 DARS2Q6PI48 645 aaKnown RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 C1orf228Q6PIY5 440 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 RHBDF2Q6PJF5 856 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 CRTC3Q6UUV7 619 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 NPNTQ6UXI9 565 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 RFX8Q6ZV50 586 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 ACAD11Q709F0 780 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 TMCO2Q7Z6W1 182 aaPredicted RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 TADA2BQ86TJ2 420 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 ZC3H18Q86VM9 953 aaKnown RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 PYROXD2Q8N2H3 581 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 CELF5Q8N6W0 485 aaKnown RBP8.93□□□□□ -0.98
TPM3-213ENST00000368545 PDZD8Q8NEN9 1154 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 RTP4Q96DX8 246 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 NELL2Q99435 816 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 FERMT1Q9BQL6 677 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 FNIP2Q9P278 1114 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 ANAPC5Q9UJX4 755 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 SHOC2Q9UQ13 582 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 HEY1Q9Y5J3 304 aa8.93□□□□□ -0.98
TPM3-213ENST00000368545 PLXNA4Q9HCM2 1894 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 KLHL33A6NCF5 533 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 SLC38A8A6NNN8 435 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 A6NNZ2 444 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 AURKAO14965 403 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 NCAM2O15394 837 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 LAMTOR5O43504 91 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 IFNGR1P15260 489 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 CNR2P34972 360 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 SERPINB6P35237 376 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 GPR3P46089 330 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 VPS41P49754 854 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 GPS1Q13098 491 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 MORF4L2Q15014 288 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 PAFAH1B3Q15102 231 aaKnown RBP8.92□□□□□ -0.98
TPM3-213ENST00000368545 CSRP2Q16527 193 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 HIBCHQ6NVY1 386 aaPredicted RBP8.92□□□□□ -0.98
TPM3-213ENST00000368545 VPS52Q8N1B4 723 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 ZNF276Q8N554 614 aa8.92□□□□□ -0.98
TPM3-213ENST00000368545 ZBTB44Q8NCP5 570 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms