RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 MAP3K13O43283 966 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 ENTPD5O75356 428 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 NDST3O95803 873 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 FASP25445 335 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 DPYSL2Q16555 572 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 CPSF6Q16630 551 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 DRICH1Q6PGQ1 229 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 SYT12Q8IV01 421 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 OR6Y1Q8NGX8 325 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 SPPL2AQ8TCT8 520 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 CXorf40AQ8TE69 158 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 MYO19Q96H55 970 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 BCO2Q9BYV7 579 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 SUFUQ9UMX1 484 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 CPQQ9Y646 472 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 CRYBG1Q9Y4K1 1723 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 MATN3O15232 486 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 PIK3CGP48736 1102 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 CCT8P50990 548 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 NEK3P51956 506 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 ABRQ12979 859 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 SAMD4BQ5PRF9 694 aaKnown RBP12.36□□□□□ -0.43
PTPRK-203ENST00000368207 PPP1R15BQ5SWA1 713 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 ISLR2Q6UXK2 745 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 OSTM1Q86WC4 334 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-203ENST00000368207 NIPA2Q8N8Q9 360 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 RTL3Q8N8U3 475 aaKnown RBP12.36□□□□□ -0.43
PTPRK-203ENST00000368207 ATG16L2Q8NAA4 619 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 PPP1R16AQ96I34 528 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 C1orf50Q9BV19 199 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 SLC39A8Q9C0K1 460 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 AHSPQ9NZD4 102 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 STYXL1Q9Y6J8 313 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 STBD1O95210 358 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 COX4I1P13073 169 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 NMBRP28336 390 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 CCDC85BQ15834 202 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-203ENST00000368207 MTSS1LQ765P7 747 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 GLIS1Q8NBF1 620 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 GDPD5Q8WTR4 605 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 NXNL1Q96CM4 212 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 CCDC3Q9BQI4 270 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 SLC25A51Q9H1U9 297 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 CNTN3Q9P232 1028 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 MSRAQ9UJ68 235 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 FGBP02675 491 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 NTRK1P04629 796 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 GRIA1P42261 906 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 CHRNA4P43681 627 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 GPR15P49685 360 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 FBXO48Q5FWF7 155 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 ACBD5Q5T8D3 534 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-203ENST00000368207 TAPT1Q6NXT6 567 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 ZC3H3Q8IXZ2 948 aaKnown RBP12.36□□□□□ -0.43
PTPRK-203ENST00000368207 MICU2Q8IYU8 434 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 ZNF513Q8N8E2 541 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-203ENST00000368207 ZNF398Q8TD17 642 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 TNKS2Q9H2K2 1166 aa12.36□□□□□ -0.43
PTPRK-203ENST00000368207 ULK1O75385 1050 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 MPSTP25325 297 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 MAPK9P45984 424 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 CLK1P49759 484 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 YTHDF3Q7Z739 585 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 ADAMTSL2Q86TH1 951 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 TLE6Q9H808 572 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 ZFYVE1Q9HBF4 777 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 COMMD8Q9NX08 183 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 H2AFY2Q9P0M6 372 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 GABRQQ9UN88 632 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 A0A1B0GVM2 712 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 TCAF2A6NFQ2 919 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 PRR5-ARHGAP8B1AHC4 643 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 IRAK2O43187 625 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 HNRNPRO43390 633 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 VPS4BO75351 444 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 SLC25A14O95258 325 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 ARHGAP8P85298 464 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 ALDH6A1Q02252 535 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 HECTD2Q5U5R9 776 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 LRRC74BQ6ZQY2 392 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 CYP4X1Q8N118 509 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 DNAJB14Q8TBM8 379 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 VPS33AQ96AX1 596 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 SEMA6AQ9H2E6 1030 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 ZDHHC18Q9NUE0 388 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 CACNA2D2Q9NY47 1150 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 C6orf203Q9P0P8 240 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 NCKAP1Q9Y2A7 1128 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 TCRBV7S3A2A0A539 114 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 SLC38A8A6NNN8 435 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 THOP1P52888 689 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 OASLQ15646 514 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 TRIP4Q15650 581 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 FAM98BQ52LJ0 330 aaKnown RBP12.35□□□□□ -0.43
PTPRK-203ENST00000368207 BBS7Q8IWZ6 715 aa12.35□□□□□ -0.43
PTPRK-203ENST00000368207 SLC35F5Q8WV83 523 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms