RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 UXS1Q8NBZ7 420 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 MOSPD2Q8NHP6 518 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 PXYLP1Q8TE99 480 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 HIST1H2ACQ93077 130 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 ARHGAP39Q9C0H5 1083 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 BTBD1Q9H0C5 482 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 UNC93B1Q9H1C4 597 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 ASB7Q9H672 318 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 POLE4Q9NR33 117 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 BARHL2Q9NY43 387 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 TUBGCP4Q9UGJ1 667 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 CACNA1FO60840 1977 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 DISP2A7MBM2 1401 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 CLDN4O14493 209 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 TNFAIP8O95379 198 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 ITGA1P56199 1179 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 SESN2P58004 480 aaPredicted RBP8.69□□□□□ -1.02
SYNE1-206ENST00000367253 TRIM32Q13049 653 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 MYBPC3Q14896 1274 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 ZNF57Q68EA5 555 aaPredicted RBP8.69□□□□□ -1.02
SYNE1-206ENST00000367253 ANKRD26P1Q6NSI1 321 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 IRGCQ6NXR0 463 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 TTC7BQ86TV6 843 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 SYNPOQ8N3V7 929 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 MAB21L3Q8N8X9 362 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
SYNE1-206ENST00000367253 SLC9A6Q92581 669 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 TCEAL3Q969E4 200 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 WDR24Q96S15 920 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 TRIM51Q9BSJ1 452 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 PRRG3Q9BZD7 231 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 DPEP2Q9H4A9 486 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 FAM105AQ9NUU6 356 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 RIC8BQ9NVN3 520 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 PCYT1BQ9Y5K3 369 aaPredicted RBP8.69□□□□□ -1.02
SYNE1-206ENST00000367253 DGKBQ9Y6T7 804 aa8.69□□□□□ -1.02
SYNE1-206ENST00000367253 ARHGEF33A8MVX0 844 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 PHGDHO43175 533 aaKnown RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 HSPA12AO43301 675 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ZNF217O75362 1048 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 LRCH4O75427 683 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 MICAL2O94851 1124 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 LTFP02788 710 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 HEXAP06865 529 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 SMIM10L2AP0DMW4 78 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 SMIM10L2BP0DMW5 78 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ARP10275 920 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 PCP4P48539 62 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ACLYP53396 1101 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 LMAN2Q12907 356 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 DUSP28Q4G0W2 176 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 INTS6LQ5JSJ4 861 aaKnown RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 GMCL1P1Q8NEA9 526 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 FDXACB1Q9BRP7 624 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 C6orf62Q9GZU0 229 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 FTSJ1Q9UET6 329 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ZNHIT2Q9UHR6 403 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 AAR2Q9Y312 384 aaKnown RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 OR10H1Q9Y4A9 318 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 FAM234BA2RU67 622 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 CER1O95813 267 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 COL6A1P12109 1028 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ITIH2P19823 946 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 RAD23AP54725 363 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 GHRHRQ02643 423 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 TUBB3Q13509 450 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 GALNT3Q14435 633 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 PAQR7Q86WK9 346 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 CLVS1Q8IUQ0 354 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 GPR156Q8NFN8 814 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 GPR152Q8TDT2 470 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 FRS2Q8WU20 508 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 C5orf34Q96MH7 638 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 CDADC1Q9BWV3 514 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 RGS18Q9NS28 235 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 VANGL2Q9ULK5 521 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 H0YGN5 161 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 SH2B2O14492 632 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ENDOD1O94919 500 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ATP6V1G2O95670 118 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 NFICP08651 508 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 RBP3P10745 1247 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 PCNAP12004 261 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ZNF7P17097 686 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 OR1D2P34982 312 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 HOXD12P35452 270 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ARSEP51690 589 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 INHBCP55103 352 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 CHRNB3Q05901 458 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 ZNF267Q14586 743 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 SHROOM1Q2M3G4 852 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 PDCD4Q53EL6 469 aaKnown RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 SSX6Q7RTT6 188 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 GALNT15Q8N3T1 639 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 MAFAQ8NHW3 353 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 WDR36Q8NI36 951 aaKnown RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 PTCD3Q96EY7 689 aaKnown RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 RMND5BQ96G75 393 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-206ENST00000367253 C11orf70Q9BRQ4 267 aa8.68□□□□□ -1.02
SYNE1-206ENST00000367253 C17orf80Q9BSJ5 609 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms