RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CCDC142Q17RM4 750 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 AASDHQ4L235 1098 aaPredicted RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 TXNDC8Q6A555 127 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 IL31Q6EBC2 164 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 USP49Q70CQ1 688 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 TMEM150AQ86TG1 271 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 KBTBD6Q86V97 674 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 WDR5BQ86VZ2 330 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 SFR1Q86XK3 245 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 CMTM8Q8IZV2 173 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 THEM5Q8N1Q8 247 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 SPPL2BQ8TCT7 592 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 NOC3LQ8WTT2 800 aaKnown RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 POMGNT1Q8WZA1 660 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 RAD54LQ92698 747 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 USP13Q92995 863 aaPredicted RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 RNF31Q96EP0 1072 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 AK8Q96MA6 479 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 TSPAN18Q96SJ8 248 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 AGAP2Q99490 1192 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 SMAD5Q99717 465 aaKnown RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 PI4K2AQ9BTU6 479 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 ALOXE3Q9BYJ1 711 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 ASB7Q9H672 318 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 FBRSL1Q9HCM7 1045 aaKnown RBP5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 RXFP3Q9NSD7 469 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 TBC1D7Q9P0N9 293 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 C11orf21Q9P2W6 132 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 HSFX1Q9UBD0 423 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 SLC8A2Q9UPR5 921 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 DERAQ9Y315 318 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 C2CD2Q9Y426 696 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 ANAPC1Q9H1A4 1944 aa5.52□□□□□ -1.53
RNU4-4P-201ENST00000364588 KIAA1549LQ6ZVL6 1849 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 HELZP42694 1942 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 LAMA1P25391 3075 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PIPSLA2A3N6 862 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CDHR4A6H8M9 788 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 GOLGA8IPA6NC78 632 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 GOLGA8JA6NMD2 632 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 HTRA2O43464 458 aaPredicted RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 HCRTO43612 131 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PCDHGA12O60330 932 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 RPP40O75818 363 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 HMGA1P17096 107 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 SCP2P22307 547 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 FDXRP22570 491 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PAX3P23760 479 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 SLC6A2P23975 617 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CCND1P24385 295 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CYP2F1P24903 491 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 ADSSP30520 456 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 HOXA6P31267 233 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CXADRP78310 365 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 TFAMQ00059 246 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 TSPY1Q01534 308 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 GRSF1Q12849 480 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 TP53BP2Q13625 1128 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 RABEP1Q15276 862 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 ST3GAL2Q16842 350 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 UAP1L1Q3KQV9 507 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 TMEM196Q5HYL7 178 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CRELD2Q6UXH1 353 aaPredicted RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CACNA2D4Q7Z3S7 1137 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 DCP1BQ8IZD4 617 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 TMEM132CQ8N3T6 1108 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PDCL2Q8N4E4 241 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 BEND2Q8NDZ0 799 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 IFI44Q8TCB0 444 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 C2orf15Q8WU43 125 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 MRPS31Q92665 395 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 SAAL1Q96ER3 474 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 EPSTI1Q96J88 318 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 ZNF560Q96MR9 790 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 MED15Q96RN5 788 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 SLC22A12Q96S37 553 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CYP2S1Q96SQ9 504 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PNKPQ96T60 521 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 MYOCQ99972 504 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 ZSWIM1Q9BR11 485 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 FAM213AQ9BRX8 229 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PACSIN1Q9BY11 444 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 ASPSCR1Q9BZE9 553 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CCSER1Q9C0I3 900 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 MRPL44Q9H9J2 332 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 GALNT9Q9HCQ5 603 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 TRPC7Q9HCX4 862 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CALCOCO1Q9P1Z2 691 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 AGAP1Q9UPQ3 857 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 SMC3Q9UQE7 1217 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 MTO1Q9Y2Z2 717 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PCDHGA9Q9Y5G4 932 aaKnown RBP5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PCDHGA8Q9Y5G5 932 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PCDHGA7Q9Y5G6 932 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PCDHGA6Q9Y5G7 932 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 PCDHGA3Q9Y5H0 932 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 CACNA1BQ00975 2339 aa5.51□□□□□ -1.53
RNU4-4P-201ENST00000364588 NUP205Q92621 2012 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 THADAQ6YHU6 1953 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 VPS37CA5D8V6 355 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms