RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 RTP3Q9BQQ7 232 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 CAAP1Q9H8G2 361 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 DTNAQ9Y4J8 743 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 HS3ST4Q9Y661 456 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 RBBP6Q7Z6E9 1792 aaKnown RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 LBX1P52954 281 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 TUBA4AP68366 448 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 MGAT5Q09328 741 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 BRMS1LQ5PSV4 323 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 TIGD7Q6NT04 549 aaPredicted RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 ENDOVQ8N8Q3 282 aaKnown RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 APBB2Q92870 758 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 HMCESQ96FZ2 354 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 ZFRQ96KR1 1074 aaKnown RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 HAPLN3Q96S86 360 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 OLA1Q9NTK5 396 aaKnown RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 MTMR10Q9NXD2 777 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 GIN1Q9NXP7 522 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 DMTF1Q9Y222 760 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 CLUHO75153 1309 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 TLL1O43897 1013 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 FYNP06241 537 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CDK4P11802 303 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 PRKACBP22694 351 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 XPAP23025 273 aaPredicted RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 CXCR3P49682 368 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 DEFB103AP81534 67 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 SPDYCQ5MJ68 293 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 ATG16L1Q676U5 607 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 TXNDC8Q6A555 127 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 ZNF470Q6ECI4 717 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 LINC00523Q86TU6 105 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 LINC01599Q8WXQ3 324 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 IRGQQ8WZA9 623 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 TBL1YQ9BQ87 522 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 EPB41L4BQ9H329 900 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 PCDH12Q9NPG4 1184 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 TRHDEQ9UKU6 1024 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 PARP14Q460N5 1801 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 C15orf38-AP3S2A0A0A6YYH1 394 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 J3KR12 359 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 NEMP1O14524 444 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 GCATO75600 419 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 GJB5O95377 273 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CSH1P0DML2 217 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CSH2P0DML3 217 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CORO1AP31146 461 aaKnown RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 IFNA8P32881 189 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 PTPN7P35236 360 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CSE1LP55060 971 aaKnown RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 DSC2Q02487 901 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 GALNT3Q14435 633 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 ALFQ53S48 1182 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CMPK2Q5EBM0 449 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 FBXL22Q6P050 247 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 ACAD11Q709F0 780 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 ARPINQ7Z6K5 226 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 LDB1Q86U70 411 aaPredicted RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 LZTR1Q8N653 840 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 RFWD2Q8NHY2 731 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 PYDC1Q8WXC3 89 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 SLC9A7Q96T83 725 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 NDFIP2Q9NV92 336 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 UXTQ9UBK9 157 aaPredicted RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 RPL26L1Q9UNX3 145 aaKnown RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 CRYL1Q9Y2S2 319 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 PABPN1LA6NDY0 278 aaKnown RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 SYCE1LA8MT33 242 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 M0QZQ0 153 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CCL16O15467 120 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 FGF10O15520 208 aaPredicted RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 TOP3BO95985 862 aaKnown RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 HSPA1AP0DMV8 641 aaKnown RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 HSPA1BP0DMV9 641 aaKnown RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 PGAM1P18669 254 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 PGGT1BP53609 377 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CYP4F8P98187 520 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CTC1Q2NKJ3 1217 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 GALNTL6Q49A17 601 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 PPM1JQ5JR12 505 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 RNF219Q5W0B1 726 aaPredicted RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 PNPLA1Q8N8W4 532 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 LPCAT1Q8NF37 534 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 E2F7Q96AV8 911 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CERS2Q96G23 380 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 BTN2A3PQ96KV6 586 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 SLC2A13Q96QE2 648 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 MRPL46Q9H2W6 279 aaKnown RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 EHD1Q9H4M9 534 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 MARCH7Q9H992 704 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CYP4F12Q9HCS2 524 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 INIPQ9NRY2 104 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 FAM32AQ9Y421 112 aaKnown RBP9.24□□□□□ -0.93
CALD1-202ENST00000361901 WDR90Q96KV7 1748 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 TPP1O14773 563 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CCDC159P0C7I6 412 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 GM2AP17900 193 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 SERPINB9P50453 376 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 WNT3AP56704 352 aa9.24□□□□□ -0.93
CALD1-202ENST00000361901 CDC16Q13042 620 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms