RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ANKRD66B4E2M5 251 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 RIOK3O14730 519 aaKnown RBP13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 NDST3O95803 873 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 MT-CYBP00156 380 aaPredicted RBP13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 CYP2A6P11509 494 aaPredicted RBP13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 HLA-DPA1P20036 260 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 PSMB4P28070 264 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 ACSL1P33121 698 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 EPHB1P54762 984 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 WNT3AP56704 352 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 TAS2R38P59533 333 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 RPL6Q02878 288 aaKnown RBP13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 SEMA5AQ13591 1074 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 DHX34Q14147 1143 aaKnown RBP13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 ELF2Q15723 593 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 TMEM52BQ4KMG9 183 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 KCTD11Q693B1 232 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 CEP68Q76N32 757 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 LPCAT2Q7L5N7 544 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 LINC00523Q86TU6 105 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 PAF1Q8N7H5 531 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 PDCD6IPQ8WUM4 868 aaKnown RBP13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 ASB12Q8WXK4 309 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 OXNAD1Q96HP4 312 aaPredicted RBP13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 LOXL4Q96JB6 756 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 MRGPRX2Q96LB1 330 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 FSD1LQ9BXM9 530 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 KCTD5Q9NXV2 234 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 NEU2Q9Y3R4 380 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 MRFAP1Q9Y605 127 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 MUC6Q6W4X9 2439 aa13.91□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3DA0A087WVF3 549 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3IA0A087WXS9 549 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3EA0A087X179 549 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3KA0A087X1G2 549 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 A0A0J9YYE9 177 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3FA6NER0 549 aaPredicted RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 METTL12A8MUP2 240 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3LB9A6J9 549 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 AP3B1O00203 1094 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 NEMP1O14524 444 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 LATO43561 262 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 PMPCBO75439 489 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 METTL18O95568 372 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 AP2A1O95782 977 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TRBC1P01850 177 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 FGF1P05230 155 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 PDHA1P08559 390 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3HP0C7X1 549 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 ZNF30P17039 623 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 RPL22P35268 128 aaKnown RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 ADRA1AP35348 466 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 MMP12P39900 470 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 NBL1P41271 181 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 ABL2P42684 1182 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 RPS21P63220 83 aaKnown RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 CDK16Q00536 496 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 SIM2Q14190 667 aaPredicted RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 PLK5Q496M5 336 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 WDR45BQ5MNZ6 344 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 SYCP2LQ5T4T6 812 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 PMS2CLQ68D20 193 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3GQ6DHY5 549 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3CQ6IPX1 549 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 NAPEPLDQ6IQ20 393 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 RANBP10Q6VN20 620 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 DPPA4Q7L190 304 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 MAATS1Q7Z4T9 603 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 FAM124AQ86V42 546 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 ZSWIM9Q86XI8 627 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TBC1D3Q8IZP1 549 aaPredicted RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 FAM160A2Q8N612 972 aaPredicted RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 MNS1Q8NEH6 495 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 ATOH1Q92858 354 aaPredicted RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 GORASP1Q9BQQ3 440 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 MLPHQ9BV36 600 aaPredicted RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 GPR174Q9BXC1 333 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 DDX47Q9H0S4 455 aaKnown RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 TRABDQ9H4I3 376 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 MAGEE1Q9HCI5 957 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 PCDH12Q9NPG4 1184 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 CD93Q9NPY3 652 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 EIF2B3Q9NR50 452 aaKnown RBP13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 CHKBQ9Y259 395 aa13.9□□□□□ -0.18
NSMCE1-201ENST00000361439 PSMD11O00231 422 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 PLK4O00444 970 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 RNGTTO60942 597 aaKnown RBP13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 SUN1O94901 812 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 KRT14P02533 472 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 HOXD12P35452 270 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 DR1Q01658 176 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 AGERQ15109 404 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 SLC1A5Q15758 541 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 KIAA0895LQ68EN5 471 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 HORMAD1Q86X24 394 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 LPCAT1Q8NF37 534 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 IPMKQ8NFU5 416 aa13.89□□□□□ -0.19
NSMCE1-201ENST00000361439 CXorf40AQ8TE69 158 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms