RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 DENND4AQ7Z401 1863 aa21.11■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TMEM120BA0PK00 339 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TRIM49D1C9J1S8 452 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PRPF4O43172 522 aaKnown RBP eCLIP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 SOCS5O75159 536 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 SIN3BO75182 1162 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 VAPBO95292 243 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PDHA1P08559 390 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ARNTP27540 789 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 GBP2P32456 591 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 RPL26P61254 145 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 BCL2L1Q07817 233 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 DNAJC3Q13217 504 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CCDC85BQ15834 202 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 GEN1Q17RS7 908 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PLPP6Q8IY26 295 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 BLOC1S5Q8TDH9 187 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ELSPBP1Q96BH3 223 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ALKBH8Q96BT7 664 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 MSLNLQ96KJ4 702 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TNKS2Q9H2K2 1166 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CCDC134Q9H6E4 229 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 KCNK9Q9NPC2 374 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 HPS4Q9NQG7 708 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 IARS2Q9NSE4 1012 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 EVLQ9UI08 416 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 RPL26L1Q9UNX3 145 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ERVW-1Q9UQF0 538 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PSAT1Q9Y617 370 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ANKRD66B4E2M5 251 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TRIM24O15164 1050 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 HTRA2O43464 458 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TULP3O75386 442 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CRTAMO95727 393 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ASLP04424 464 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 LAMP2P13473 410 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CHN1P15882 459 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 KRT4P19013 534 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 LTBRP36941 435 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CSE1LP55060 971 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ACVR1Q04771 509 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 QPCTQ16769 361 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 GAB4Q2WGN9 574 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ARMC12Q5T9G4 340 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TIFABQ6ZNK6 161 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 C12orf40Q86WS4 652 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 OR13J1Q8NGT2 312 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 MDM1Q8TC05 714 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TUBGCP5Q96RT8 1024 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 AGAP2Q99490 1192 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ATP13A3Q9H7F0 1226 aa21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 INTS9Q9NV88 658 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3A-201ENST00000360668 HMX2A2RU54 273 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 GMNCA6NCL1 334 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TRAFD1O14545 582 aaPredicted RBP21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PGLSO95336 258 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 DLG2Q15700 870 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 MYLK3Q32MK0 819 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CARD16Q5EG05 197 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 EP400NLQ6ZTU2 488 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 STRA8Q7Z7C7 330 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 YAF2Q8IY57 180 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 C4orf33Q8N1A6 199 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CPA6Q8N4T0 437 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 GABPB2Q8TAK5 448 aaPredicted RBP21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 STYXQ8WUJ0 223 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PDCD6IPQ8WUM4 868 aaKnown RBP21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 MYO19Q96H55 970 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 FAM167BQ9BTA0 163 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 SLCO3A1Q9UIG8 710 aa21.09■□□□□ 0.97
MAP1LC3A-201ENST00000360668 FAM47DPA6NHR8 397 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PRKCGP05129 697 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ATP5BP06576 529 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 SRPRAP08240 638 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PSMC3P17980 439 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 SPRP35270 261 aaPredicted RBP21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 NNMTP40261 264 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 GRIA4P48058 902 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 SLC18A2Q05940 514 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 THOC5Q13769 683 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TAF1AQ15573 450 aaPredicted RBP21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 SMAD1Q15797 465 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 ACCSLQ4AC99 568 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 MROH9Q5TGP6 573 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 TTC19Q6DKK2 380 aaPredicted RBP21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 SH2D5Q6ZV89 423 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CAMK1DQ8IU85 385 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 MICALL1Q8N3F8 863 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 OR6K2Q8NGY2 324 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CALML6Q8TD86 181 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 BCAS4Q8TDM0 211 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 SERAC1Q96JX3 654 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 MRGPRX3Q96LB0 322 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 NECTIN4Q96NY8 510 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 RBBP8Q99708 897 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 CPEB1Q9BZB8 566 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 POMKQ9H5K3 350 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 HACD3Q9P035 362 aa21.08■□□□□ 0.97
MAP1LC3A-201ENST00000360668 PCDHB9Q9Y5E1 797 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms