RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-202ENST00000359082 PGM2Q96G03 612 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 SLC39A8Q9C0K1 460 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 ZNF780BQ9Y6R6 833 aa18.47■□□□□ 0.55
SHANK1-202ENST00000359082 SASH3O75995 380 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 ZBTB11O95625 1053 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-202ENST00000359082 SPDYCQ5MJ68 293 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 SERPINA13PQ6UXR4 307 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 TMEM134Q9H6X4 195 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 CLDN5O00501 218 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 HDCP19113 662 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 KCNK18Q7Z418 384 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 C18orf25Q96B23 403 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-202ENST00000359082 TINF2Q9BSI4 451 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 DDX4Q9NQI0 724 aaKnown RBP18.46■□□□□ 0.55
SHANK1-202ENST00000359082 FAM92AA1XBS5 289 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 PSIP1O75475 530 aaKnown RBP18.46■□□□□ 0.55
SHANK1-202ENST00000359082 ANPEPP15144 967 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 MRPS6P82932 125 aaKnown RBP18.46■□□□□ 0.55
SHANK1-202ENST00000359082 PPP1R26Q5T8A7 1209 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-202ENST00000359082 CROCCP3Q8IVE0 287 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 GPN3Q9UHW5 284 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-202ENST00000359082 CXCL11O14625 94 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 ADCY6O43306 1168 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 PLOD3O60568 738 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 SCN2BO60939 215 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 PIAS1O75925 651 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 RPL22P35268 128 aaKnown RBP18.46■□□□□ 0.55
SHANK1-202ENST00000359082 STARP49675 285 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 FAM151BQ6UXP7 276 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 FAM83AQ86UY5 434 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 C10orf107Q8IVU9 208 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 KIAA0319LQ8IZA0 1049 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 OR52K2Q8NGK3 314 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 LINGO1Q96FE5 620 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 ZNF558Q96NG5 402 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 SEMA3CQ99985 751 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 ZNF304Q9HCX3 659 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 RFX4Q33E94 735 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 CRTC3Q6UUV7 619 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 TRPV3Q8NET8 790 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 FUCA2Q9BTY2 467 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 CHID1Q9BWS9 393 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 BLOC1S4Q9NUP1 217 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 EVA1BQ9NVM1 165 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 ETAA1Q9NY74 926 aa18.46■□□□□ 0.55
SHANK1-202ENST00000359082 LYPLA1O75608 230 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-202ENST00000359082 HNRNPLP14866 589 aaKnown RBP eCLIP18.45■□□□□ 0.54
SHANK1-202ENST00000359082 BMP7P18075 431 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 IQSEC1Q6DN90 963 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 PGBD2Q6P3X8 592 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 ITCHQ96J02 903 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 PANX1Q96RD7 426 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 CAB39LQ9H9S4 337 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 KCNQ5Q9NR82 932 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.45■□□□□ 0.54
SHANK1-202ENST00000359082 URADA6NGE7 173 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 CTNNB1P35222 781 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 PTPRNQ16849 979 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 CXXC5Q7LFL8 322 aaKnown RBP18.45■□□□□ 0.54
SHANK1-202ENST00000359082 DEPDC4Q8N2C3 294 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 MRPL57Q9BQC6 102 aaKnown RBP18.45■□□□□ 0.54
SHANK1-202ENST00000359082 TRIM39Q9HCM9 518 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 RAB21Q9UL25 225 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 PGM3O95394 542 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 CLUP10909 449 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 CTBP1Q13363 440 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 SNAP47Q5SQN1 464 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 TTC27Q6P3X3 843 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 TNS4Q8IZW8 715 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 AADATQ8N5Z0 425 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 LNX1Q8TBB1 728 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-202ENST00000359082 PTCD3Q96EY7 689 aaKnown RBP18.45■□□□□ 0.54
SHANK1-202ENST00000359082 PWWP2AQ96N64 755 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 RNF208Q9H0X6 261 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 TNKS2Q9H2K2 1166 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 PRDM16Q9HAZ2 1276 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 KIAA1210Q9ULL0 1709 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 NPEPPSL1A6NEC2 478 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 AHCYL1O43865 530 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 KRT36O76013 467 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 CASP5P51878 434 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 KCTD19Q17RG1 926 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-202ENST00000359082 NEK5Q6P3R8 708 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 BHLHB9Q6PI77 547 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 NEK6Q9HC98 313 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 MYPNQ86TC9 1320 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 UBA1P22314 1058 aaKnown RBP18.45■□□□□ 0.54
SHANK1-202ENST00000359082 GLRA2P23416 452 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 SCRN3Q0VDG4 424 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 NT5DC1Q5TFE4 455 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 GPR107Q5VW38 600 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 MAPRE3Q9UPY8 281 aa18.45■□□□□ 0.54
SHANK1-202ENST00000359082 A0A0U1RQJ8 604 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 RGSL1A5PLK6 1076 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 DCCP43146 1447 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 PTCHD4Q6ZW05 846 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 AMIGO2Q86SJ2 522 aa18.44■□□□□ 0.54
SHANK1-202ENST00000359082 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-202ENST00000359082 SAMHD1Q9Y3Z3 626 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms